U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    uncNacbeta uncharacterized nascent polypeptide-associated complex beta subunit [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33232, updated on 10-May-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    uncNacbetaprovided by FlyBase
    Official Full Name
    uncharacterized nascent polypeptide-associated complex beta subunitprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031264
    Locus tag
    Dmel_CG11835
    See related
    AllianceGenome:FB:FBgn0031264
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG11835; Dmel\CG11835; uncNAC-beta
    Summary
    Predicted to be part of nascent polypeptide-associated complex. Predicted to be active in cytosol and polysomal ribosome. Is expressed in adult head. Orthologous to human BTF3L4 (basic transcription factor 3 like 4). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See uncNacbeta in Genome Data Viewer
    Location:
    21E2-21E2; 2-1.5 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (560568..563819, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (560568..563819, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene nicotinic Acetylcholine Receptor beta3 Neighboring gene Ets at 21C Neighboring gene reduced mechanoreceptor potential A Neighboring gene Translocator protein Neighboring gene uncharacterized protein Neighboring gene Notchless Neighboring gene Splicing factor 3b subunit 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Extended disordered regions of ribosome-associated NAC proteins paralogs belong only to the germline in Drosophila melanogaster. Kogan GL, et al. Sci Rep, 2022 Jul 1. PMID 35778515, Free PMC Article
    2. A cell atlas of adult muscle precursors uncovers early events in fibre-type divergence in Drosophila. Zappia MP, et al. EMBO Rep, 2020 Oct 5. PMID 32815271, Free PMC Article
    3. Systematic identification of functional orthologs based on protein network comparison. Bandyopadhyay S, et al. Genome Res, 2006 Mar. PMID 16510899, Free PMC Article
    4. Microarray comparison of anterior and posterior Drosophila wing imaginal disc cells identifies novel wing genes. Ibrahim DM, et al. G3 (Bethesda), 2013 Aug 7. PMID 23749451, Free PMC Article
    5. Discovery of genes with highly restricted expression patterns in the Drosophila wing disc using DNA oligonucleotide microarrays. Butler MJ, et al. Development, 2003 Feb. PMID 12505997

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of nascent polypeptide-associated complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of nascent polypeptide-associated complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative nascent polypeptide-associated complex beta subunit
    Names
    CG11835-PA
    CG11835-PB
    CG11835-PC
    CG11835-PD
    uncNacbeta-PA
    uncNacbeta-PB
    uncNacbeta-PC
    uncNacbeta-PD

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      560568..563819 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298620.1 → NP_001285549.1  putative nascent polypeptide-associated complex beta subunit, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285549.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPR2
      Conserved Domains (1) summary
      pfam01849
      Location:38 → 91
      NAC; NAC domain

    2. NM_001272906.1 → NP_001259835.1  putative nascent polypeptide-associated complex beta subunit, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259835.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPR2
      Conserved Domains (1) summary
      pfam01849
      Location:38 → 91
      NAC; NAC domain

    3. NM_134688.3 → NP_608532.1  putative nascent polypeptide-associated complex beta subunit, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608532.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPR2
      Related
      FBpp0077736
      Conserved Domains (1) summary
      pfam01849
      Location:38 → 91
      NAC; NAC domain

    4. NM_001272907.1 → NP_001259836.1  putative nascent polypeptide-associated complex beta subunit, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001259836.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPR2
      Conserved Domains (1) summary
      pfam01849
      Location:38 → 91
      NAC; NAC domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VPR2 Q9VPR2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous