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    Gsc Goosecoid [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33240, updated on 10-May-2024

    Summary

    Official Symbol
    Gscprovided by FlyBase
    Official Full Name
    Goosecoidprovided by FlyBase
    Primary source
    FLYBASE:FBgn0010323
    Locus tag
    Dmel_CG2851
    See related
    AllianceGenome:FB:FBgn0010323
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    60Mun1; 60Mun2; CG2851; D-gsc; D-Gsc; Dmel\CG2851; gsc; GSC; l(2)05341; M72; Pph25; PPH25
    Summary
    Enables DNA-binding transcription repressor activity, RNA polymerase II-specific; protein heterodimerization activity; and protein homodimerization activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in several structures, including adult protocerebrum; embryonic/larval central nervous system; embryonic/larval gut; presumptive embryonic/larval system; and procephalic neurogenic region. Orthologous to human GSC (goosecoid homeobox) and GSC2 (goosecoid homeobox 2). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    See Gsc in Genome Data Viewer
    Location:
    21E2-21E2; 2-1.5 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (583540..594685, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (583544..594685, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene coiled Neighboring gene Prothoracicotropic hormone Neighboring gene PvuII-PstI homology 13 Neighboring gene long non-coding RNA:CR46148 Neighboring gene long non-coding RNA:CR43648 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    goosecoid
    Names
    CG2851-PC
    CG2851-PD
    CG2851-PE
    Gsc-PC
    Gsc-PD
    Gsc-PE
    muenster 72
    NP_001137762.2
    • non-AUG (AUU) translation initiation

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      583540..594685 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001316376.1NP_001303305.1  goosecoid, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0S0WGV8
      Conserved Domains (1) summary
      cl00084
      Location:1930
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    2. NM_057601.3NP_476949.2  goosecoid, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_476949.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P54366, Q9VPR9
      Conserved Domains (1) summary
      pfam00046
      Location:285338
      Homeobox; Homeobox domain
    3. NM_001144290.2NP_001137762.2  goosecoid, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137762.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z003, Q0IGU0
      Conserved Domains (1) summary
      pfam00046
      Location:343396
      Homeobox; Homeobox domain