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    CG31624 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35393, updated on 4-Apr-2024

    Summary

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    Official Symbol
    CG31624provided by FlyBase
    Primary source
    FLYBASE:FBgn0051624
    Locus tag
    Dmel_CG31624
    See related
    AllianceGenome:FB:FBgn0051624
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG17401; Dmel\CG31624; Tes88
    Summary
    Predicted to enable transcription coregulator activity. Predicted to be active in cytosol; focal adhesion; and plasma membrane. Orthologous to human FHL3 (four and a half LIM domains 3) and FHL5 (four and a half LIM domains 5). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    39B1-39B1; 2-54 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21199045..21200375, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21199045..21200375, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR44911 Neighboring gene burgundy Neighboring gene Minichromosome maintenance 10 Neighboring gene Ret oncogene Neighboring gene uncharacterized protein Neighboring gene clumsy

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Roles of the LIM Domain Proteins in Drosophila Cardiac and Hematopoietic Morphogenesis. She M, et al. Front Cardiovasc Med, 2021. PMID 33681304, Free PMC Article
    2. Sex-specific role of Drosophila melanogaster HP1 in regulating chromatin structure and gene transcription. Liu LP, et al. Nat Genet, 2005 Dec. PMID 16258543
    3. Rapidly evolving genes of Drosophila: differing levels of selective pressure in testis, ovary, and head tissues between sibling species. Jagadeeshan S, et al. Mol Biol Evol, 2005 Sep. PMID 15917496
    4. Evolution of alternative splicing in newly evolved genes of Drosophila. Zhan Z, et al. Gene, 2011 Jan 1. PMID 20851753
    5. Identification of GOLPH3 Partners in Drosophila Unveils Potential Novel Roles in Tumorigenesis and Neural Disorders. Sechi S, et al. Cells, 2021 Sep 6. PMID 34571985, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31624-PA
    CG31624-PB
    CG31624-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      21199045..21200375 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299192.1 → NP_001286121.1  uncharacterized protein Dmel_CG31624, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286121.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWE9, Q9VIE3
      Conserved Domains (2) summary
      smart00132
      Location:125 → 176
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3
      cl02475
      Location:66 → 118
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    2. NM_001169560.1 → NP_001163031.1  uncharacterized protein Dmel_CG31624, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163031.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWE9, Q9VIE3
      Conserved Domains (2) summary
      smart00132
      Location:125 → 176
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3
      cl02475
      Location:66 → 118
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    3. NM_165361.3 → NP_724318.1  uncharacterized protein Dmel_CG31624, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724318.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWE9, Q9VIE3
      Related
      FBpp0081019
      Conserved Domains (2) summary
      smart00132
      Location:125 → 176
      LIM; Zinc-binding domain present in Lin-11, Isl-1, Mec-3
      cl02475
      Location:66 → 118
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2XYF8 Q2XYF8
    Q3YMR8 Q3YMR8
    Q6AWE9 Q6AWE9
    Q9VIE3 Q9VIE3

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