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    ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [ Bos taurus (cattle) ]

    Gene ID: 404164, updated on 3-Apr-2024

    Summary

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    Official Symbol
    ST3GAL5provided by VGNC
    Official Full Name
    ST3 beta-galactoside alpha-2,3-sialyltransferase 5provided by VGNC
    Primary source
    VGNC:VGNC:35334
    See related
    BGD:BT17394; Ensembl:ENSBTAG00000011601
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    SIAT9; ST3GAL-V
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (48977944..49035583)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein eS19-like Neighboring gene uncharacterized LOC112448788 Neighboring gene uncharacterized LOC112448789 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene atonal bHLH transcription factor 8 Neighboring gene uncharacterized LOC132346585

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The animal sialyltransferases and sialyltransferase-related genes: a phylogenetic approach. Harduin-Lepers A, et al. Glycobiology, 2005 Aug. PMID 15843597
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lactosylceramide alpha-2,3-sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lactosylceramide alpha-2,3-sialyltransferase
    Names
    CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase
    ST3Gal V
    ST3GalV
    alpha2,3-sialyltransferase
    ganglioside GM3 synthase
    sialyltransferase 9
    NP_991376.2
    XP_005212803.1
    XP_024854143.1
    XP_059747029.1
    XP_059747030.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205807.3 → NP_991376.2  lactosylceramide alpha-2,3-sialyltransferase

      See identical proteins and their annotated locations for NP_991376.2

      Status: PROVISIONAL

      Source sequence(s)
      AJ585768, DY079516
      UniProtKB/Swiss-Prot
      Q70D51
      UniProtKB/TrEMBL
      F1N7G6
      Related
      ENSBTAP00000069948.2, ENSBTAT00000071618.2
      Conserved Domains (1) summary
      pfam00777
      Location:144 → 412
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      48977944..49035583
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059891046.1 → XP_059747029.1  lactosylceramide alpha-2,3-sialyltransferase isoform X2

      Related
      ENSBTAP00000087698.1, ENSBTAT00000132996.1

    2. XM_005212746.5 → XP_005212803.1  lactosylceramide alpha-2,3-sialyltransferase isoform X1

      See identical proteins and their annotated locations for XP_005212803.1

      UniProtKB/TrEMBL
      A0A3Q1ML07, F1N7G6
      Conserved Domains (1) summary
      pfam00777
      Location:115 → 383
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    3. XM_059891047.1 → XP_059747030.1  lactosylceramide alpha-2,3-sialyltransferase isoform X3

    4. XM_024998375.2 → XP_024854143.1  lactosylceramide alpha-2,3-sialyltransferase isoform X4

      Conserved Domains (1) summary
      pfam00777
      Location:1 → 169
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q70D51.2 GenPept UniProtKB/Swiss-Prot:Q70D51

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