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    CARS1 cysteinyl-tRNA synthetase 1 [ Bos taurus (cattle) ]

    Gene ID: 515715, updated on 3-Apr-2024

    Summary

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    Official Symbol
    CARS1provided by VGNC
    Official Full Name
    cysteinyl-tRNA synthetase 1provided by VGNC
    Primary source
    VGNC:VGNC:26773
    See related
    Ensembl:ENSBTAG00000010777
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    CARS
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 29
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (48561965..48614661)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 5 Neighboring gene tumor necrosis factor receptor superfamily member 6 Neighboring gene U6 spliceosomal RNA Neighboring gene nucleosome assembly protein 1 like 4 Neighboring gene pleckstrin homology like domain family A member 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC137874

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cysteinyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine--tRNA ligase, cytoplasmic
    NP_001096719.1
    XP_059738905.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001103249.1 → NP_001096719.1  cysteine--tRNA ligase, cytoplasmic

      See identical proteins and their annotated locations for NP_001096719.1

      Status: PROVISIONAL

      Source sequence(s)
      BC114705
      UniProtKB/TrEMBL
      A0A3Q1N855, A4FUC8, F1N5G7
      Related
      ENSBTAP00000066203.2, ENSBTAT00000071442.2
      Conserved Domains (4) summary
      cd00672
      Location:114 → 529
      CysRS_core; catalytic core domain of cysteinyl tRNA synthetase
      cd10310
      Location:4 → 76
      GST_C_CysRS_N; Glutathione S-transferase C-terminal-like, alpha helical domain of Cysteinyl-tRNA synthetase from higher eukaryotes
      PTZ00399
      Location:99 → 823
      PTZ00399; cysteinyl-tRNA-synthetase; Provisional
      pfam01442
      Location:200 → 286
      Apolipoprotein; Apolipoprotein A1/A4/E domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      48561965..48614661
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059882922.1 → XP_059738905.1  cysteine--tRNA ligase, cytoplasmic isoform X1

      Related
      ENSBTAP00000094089.1, ENSBTAT00000117372.1
    Nucleotide Protein Strain
    Heading Accession and Version

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