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    SLC52A2 solute carrier family 52 member 2 [ Bos taurus (cattle) ]

    Gene ID: 527884, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SLC52A2
    Gene description
    solute carrier family 52 member 2
    See related
    Ensembl:ENSBTAG00000000857
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    gpcr41; GPR172A; GPR172B
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (578121..580805, complement)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 39 member 4 Neighboring gene cleavage and polyadenylation specific factor 1 Neighboring gene aarF domain containing kinase 5 Neighboring gene F-box and leucine rich repeat protein 6 Neighboring gene transmembrane protein 249

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Assessment of the gene content of the chromosomal regions flanking bovine DGAT1. Winter A, et al. Genomics, 2004 Jan. PMID 14667821
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC140520

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables riboflavin transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in riboflavin transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    solute carrier family 52, riboflavin transporter, member 2
    Names
    G protein-coupled receptor 172A
    G protein-coupled receptor 172B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075901.2 → NP_001069369.1  solute carrier family 52, riboflavin transporter, member 2 precursor

      See identical proteins and their annotated locations for NP_001069369.1

      Status: PROVISIONAL

      Source sequence(s)
      BC118403
      UniProtKB/TrEMBL
      Q148E5
      Conserved Domains (1) summary
      pfam06237
      Location:278 → 372
      DUF1011; Protein of unknown function (DUF1011)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      578121..580805 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015474343.3 → XP_015329829.1  solute carrier family 52, riboflavin transporter, member 2 isoform X1

      Conserved Domains (1) summary
      pfam06237
      Location:278 → 372
      DUF1011; Protein of unknown function (DUF1011)

    2. XM_059893279.1 → XP_059749262.1  solute carrier family 52, riboflavin transporter, member 2 isoform X1

    3. XM_025001601.2 → XP_024857369.1  solute carrier family 52, riboflavin transporter, member 2 isoform X1

      Conserved Domains (1) summary
      pfam06237
      Location:278 → 372
      DUF1011; Protein of unknown function (DUF1011)

    4. XM_015474342.3 → XP_015329828.1  solute carrier family 52, riboflavin transporter, member 2 isoform X1

      Conserved Domains (1) summary
      pfam06237
      Location:278 → 372
      DUF1011; Protein of unknown function (DUF1011)

    5. XM_015474341.3 → XP_015329827.1  solute carrier family 52, riboflavin transporter, member 2 isoform X1

      Conserved Domains (1) summary
      pfam06237
      Location:278 → 372
      DUF1011; Protein of unknown function (DUF1011)

    6. XM_025001605.2 → XP_024857373.1  solute carrier family 52, riboflavin transporter, member 2 isoform X5

      Conserved Domains (1) summary
      pfam06237
      Location:148 → 242
      DUF1011; Protein of unknown function (DUF1011)

    7. XM_059893280.1 → XP_059749263.1  solute carrier family 52, riboflavin transporter, member 2 isoform X2

      Related
      ENSBTAP00000066100.2, ENSBTAT00000083852.2

    8. XM_015474339.3 → XP_015329825.1  solute carrier family 52, riboflavin transporter, member 2 isoform X1

      Related
      ENSBTAP00000001142.4, ENSBTAT00000001142.5
      Conserved Domains (1) summary
      pfam06237
      Location:278 → 372
      DUF1011; Protein of unknown function (DUF1011)

    9. XM_059893282.1 → XP_059749265.1  solute carrier family 52, riboflavin transporter, member 2 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1N6I5

    10. XM_015474346.3 → XP_015329832.1  solute carrier family 52, riboflavin transporter, member 2 isoform X4

      UniProtKB/TrEMBL
      Q148E5
      Conserved Domains (1) summary
      pfam06237
      Location:278 → 372
      DUF1011; Protein of unknown function (DUF1011)
    Nucleotide Protein Strain
    Heading Accession and Version

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