These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001278032.2 → NP_001264961.1  protein MIX23 isoform 1

   Status: VALIDATED

   Description

   Transcript Variant: This variant (1) encodes the longest isoform (1).

   Source sequence(s)

   JAENSK010000015

   UniProtKB/TrEMBL

   A0A8V0ZM95

   Conserved Domains (1) summary

   PRK06386
   Location:19 → 71

   PRK06386; replication factor A; Reviewed

2. NM_001278033.2 → NP_001264962.1  protein MIX23 isoform 2

   Status: VALIDATED

   Description

   Transcript Variant: This variant (2) uses an alternate in-frame splice junction at the 3' end of an exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is 1 aa shorter compared to isoform 1.

   Source sequence(s)

   JAENSK010000015

   UniProtKB/TrEMBL

   A0A8V0ZM95

   Conserved Domains (1) summary

   pfam09774
   Location:10 → 134

   Cid2; Caffeine-induced death protein 2

3. NM_001278037.4 → NP_001264966.1  protein MIX23 isoform 3

   Status: VALIDATED

   Description

   Transcript Variant: This variant (3) uses an alternate in-frame splice junction at the 3' end of an exon and lacks an alternate in-frame exon compared to variant 1. The resulting isoform (3) has the same N- and C-termini but lacks two alternate internal segments compared to isoform 1.

   Source sequence(s)

   JAENSK010000015

   UniProtKB/TrEMBL

   A0A1L1RWZ8

   Related

   ENSGALP00010031825.1, ENSGALT00010052919.1

   Conserved Domains (1) summary

   PRK06386
   Location:18 → 70

   PRK06386; replication factor A; Reviewed

RNA

1. NR_102734.2 RNA Sequence

   Status: VALIDATED

   Description

   Transcript Variant: This variant (4) contains an alternate exon and uses an alternate splice site in a 5' exon, compared to variant 1. The alternate exon contains an in-frame stop codon, rendering the transcript a candidate for nonsense-mediated mRNA decay (NMD).

   Source sequence(s)

   JAENSK010000015

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

   Range

   76736991..76746205 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

   Range

   76936962..76946163 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)