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    SPIN1L spindlin 1 like [ Gallus gallus (chicken) ]

    Gene ID: 374014, updated on 3-Apr-2024

    Summary

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    Official Symbol
    SPIN1Lprovided by CGNC
    Official Full Name
    spindlin 1 likeprovided by CGNC
    Primary source
    CGNC:49005
    See related
    Ensembl:ENSGALG00010012781
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SPIN; SPIN1; SPINW; SPIN1W; chSpin-W
    Annotation information
    Annotation category: suggests misassembly
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    Genomic context

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    See SPIN1L in Genome Data Viewer
    Location:
    chromosome: W
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) W NC_052571.1 (6500543..6669172)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) W NC_059535.1 (6500543..6669172)

    Chromosome W - NC_052571.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112530495 Neighboring gene uncharacterized LOC124417488 Neighboring gene uncharacterized LOC124417489 Neighboring gene uncharacterized LOC112530492 Neighboring gene uncharacterized LOC121108210

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of the spindlin gene in birds: independent cessation of the recombination of sex chromosomes at the spindlin locus in neognathous birds and tinamous, a palaeognathous avian family. de Kloet RS, et al. Genetica, 2003 Nov. PMID 14686612
    2. Chicken spindlin genes on W and Z chromosomes: transcriptional expression of both genes and dynamic behavior of spindlin in interphase and mitotic cells. Itoh Y, et al. Chromosome Res, 2001. PMID 11419793

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in gamete generation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spindlin-W
    Names
    spindlin 1-W

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001396707.1 → NP_001383636.1  spindlin-W

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000523
      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609, A0A8V0Y8C7
      Conserved Domains (1) summary
      pfam02513
      Location:54 → 102
      Spin-Ssty; Spin/Ssty Family

    2. NM_001396708.1 → NP_001383637.1  spindlin-W

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000523
      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609, A0A8V0Y8C7
      Related
      ENSGALP00010017770.1, ENSGALT00010030648.1
      Conserved Domains (1) summary
      pfam02513
      Location:54 → 102
      Spin-Ssty; Spin/Ssty Family

    3. NM_204191.2 → NP_989522.1  spindlin-W

      See identical proteins and their annotated locations for NP_989522.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000523
      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609, A0A8V0Y8C7
      Conserved Domains (1) summary
      pfam02513
      Location:54 → 102
      Spin-Ssty; Spin/Ssty Family

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052571.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      6500543..6669172
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040655158.1 → XP_040511092.1  spindlin-W isoform X1

    2. XM_040655160.1 → XP_040511094.1  spindlin-W isoform X2

      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609, A0A8V0Y8C7
      Conserved Domains (1) summary
      pfam02513
      Location:54 → 102
      Spin-Ssty; Spin/Ssty Family

    3. XM_046905103.1 → XP_046761059.1  spindlin-W isoform X2

      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609

    4. XM_040655161.2 → XP_040511095.1  spindlin-W isoform X2

      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609, A0A8V0Y8C7
      Conserved Domains (1) summary
      pfam02513
      Location:54 → 102
      Spin-Ssty; Spin/Ssty Family

    5. XM_046905104.1 → XP_046761060.1  spindlin-W isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFW6
      Related
      ENSGALP00010017775.1, ENSGALT00010030657.1

    6. XM_040655164.2 → XP_040511098.1  spindlin-W isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y8C7, A0A8V0YFW6
      Related
      ENSGALP00010017780.1, ENSGALT00010030665.1
      Conserved Domains (1) summary
      pfam02513
      Location:29 → 77
      Spin-Ssty; Spin/Ssty Family

    7. XM_040655163.2 → XP_040511097.1  spindlin-W isoform X2

      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609, A0A8V0Y8C7
      Conserved Domains (1) summary
      pfam02513
      Location:54 → 102
      Spin-Ssty; Spin/Ssty Family

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059535.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6500543..6669172
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934405.1 → XP_046790361.1  spindlin-W isoform X1

    2. XM_046934407.1 → XP_046790363.1  spindlin-W isoform X2

      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609

    3. XM_046934409.1 → XP_046790365.1  spindlin-W isoform X2

      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609

    4. XM_046934408.1 → XP_046790364.1  spindlin-W isoform X2

      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609

    5. XM_046934410.1 → XP_046790366.1  spindlin-W isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFW6

    6. XM_046934411.1 → XP_046790367.1  spindlin-W isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFW6

    7. XM_046934406.1 → XP_046790362.1  spindlin-W isoform X2

      UniProtKB/Swiss-Prot
      Q90WG2
      UniProtKB/TrEMBL
      A0A182C609
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q90WG2.1 GenPept UniProtKB/Swiss-Prot:Q90WG2

    Gene LinkOut

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