Dnajc25 DnaJ heat shock protein family (Hsp40) member C25 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Dnajc25provided by RGD
Official Full Name: DnaJ heat shock protein family (Hsp40) member C25provided by RGD
Primary source: RGD:1561488
See related: Ensembl:ENSRNOG00000015340 AllianceGenome:RGD:1561488
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to be involved in protein folding. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to several human genes including DNAJC25-GNG10 (DNAJC25-GNG10 readthrough). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Liver (RPKM 95.8), Testes (RPKM 69.1) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 5q24

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	5	NC_086023.1 (78620608..78642921)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	5	NC_051340.1 (73825565..73847878)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	5	NC_005104.4 (76150840..76171424)

Chromosome 5 - NC_086023.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in protein folding	IBA Inferred from Biological aspect of Ancestor more info
involved_in protein folding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in endoplasmic reticulum membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: dnaJ homolog subfamily C member 25

Names: DnaJ (Hsp40) homolog, subfamily C, member 25

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001025021.1 → NP_001020192.1 dnaJ homolog subfamily C member 25 precursor

See identical proteins and their annotated locations for NP_001020192.1

Status: PROVISIONAL

Source sequence(s)

BC091296

UniProtKB/Swiss-Prot

Q5BJW9

UniProtKB/TrEMBL

F1LQT0

Related

ENSRNOP00000020702.5, ENSRNOT00000020702.6

Conserved Domains (2) summary

COG0484
Location:47 → 118

DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

pfam00226
Location:48 → 118

DnaJ; DnaJ domain