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    SYT6 synaptotagmin 6 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708175, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SYT6provided by VGNC
    Official Full Name
    synaptotagmin 6provided by VGNC
    Primary source
    VGNC:VGNC:78162
    See related
    Ensembl:ENSMMUG00000009781
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SYT6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (110049454..110114691)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (115142544..115208308, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene pyruvate kinase PKM pseudogene Neighboring gene eukaryotic translation initiation factor 2 subunit 2 pseudogene Neighboring gene tripartite motif containing 33 Neighboring gene olfactomedin like 3 Neighboring gene homeodomain interacting protein kinase 1 Neighboring gene adaptor related protein complex 4 subunit beta 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium-ion regulated exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-6
    Names
    synaptotagmin VI

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      110049454..110114691
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015148734.2 → XP_015004220.2  synaptotagmin-6 isoform X3

      UniProtKB/TrEMBL
      G7MIJ7
      Conserved Domains (2) summary
      cd08385
      Location:230 → 354
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08403
      Location:363 → 496
      C2B_Synaptotagmin-3-5-6-9-10; C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10

    2. XM_015148744.2 → XP_015004230.1  synaptotagmin-6 isoform X2

      UniProtKB/TrEMBL
      F6ZH51, H9FQC4
      Related
      ENSMMUP00000012798.3, ENSMMUT00000013658.4
      Conserved Domains (2) summary
      cd08385
      Location:145 → 269
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cd08403
      Location:278 → 411
      C2B_Synaptotagmin-3-5-6-9-10; C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10

    3. XM_028830243.1 → XP_028686076.1  synaptotagmin-6 isoform X1

      Conserved Domains (2) summary
      cd08385
      Location:217 → 341
      C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
      cl14603
      Location:350 → 384
      C2; C2 domain
    Nucleotide Protein
    Heading Accession and Version

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