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    Gm5114 predicted gene 5114 [ Mus musculus (house mouse) ]

    Gene ID: 330513, updated on 8-Feb-2024

    Summary

    Official Symbol
    Gm5114provided by MGI
    Official Full Name
    predicted gene 5114provided by MGI
    Primary source
    MGI:MGI:3647631
    See related
    Ensembl:ENSMUSG00000053742 AllianceGenome:MGI:3647631
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG330513; 4921507A12
    Summary
    Orthologous to human C2orf78 (chromosome 2 open reading frame 78). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 9.3) See more
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    Genomic context

    See Gm5114 in Genome Data Viewer
    Location:
    7 B3; 7 25.48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (39056718..39062584, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (39407294..39413160, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 33382 Neighboring gene predicted gene 29258 Neighboring gene STARR-seq mESC enhancer starr_18696 Neighboring gene topoisomerase (DNA) II binding protein 1 pseudogene Neighboring gene predicted gene 9271 Neighboring gene predicted gene, 57511 Neighboring gene family with sequence similarity 32, member A pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC330513

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177890.3NP_808558.2  uncharacterized protein LOC330513

      See identical proteins and their annotated locations for NP_808558.2

      Status: VALIDATED

      Source sequence(s)
      AC109210, AK029498
      Consensus CDS
      CCDS39917.1
      UniProtKB/TrEMBL
      W4VSN8
      Related
      ENSMUSP00000103652.2, ENSMUST00000108017.2
      Conserved Domains (1) summary
      pfam15442
      Location:435579
      DUF4629; Domain of unknown function (DUF4629)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      39056718..39062584 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)