U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RSPO1 R-spondin 1 [ Bos taurus (cattle) ]

    Gene ID: 511675, updated on 6-Jun-2024

    Summary

    Official Symbol
    RSPO1provided by VGNC
    Official Full Name
    R-spondin 1provided by VGNC
    Primary source
    VGNC:VGNC:34188
    See related
    BGD:BT20367
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See RSPO1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (108267191..108287862)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene cell division cycle associated 8 Neighboring gene chromosome 3 C1orf109 homolog Neighboring gene G protein nucleolar 2 Neighboring gene dynein axonemal light intermediate chain 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    General protein information

    Preferred Names
    R-spondin-1
    Names
    R-spondin homolog
    R-spondin1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105621.1NP_001099091.1  R-spondin-1 precursor

      See identical proteins and their annotated locations for NP_001099091.1

      Status: PROVISIONAL

      Source sequence(s)
      BC149052
      UniProtKB/TrEMBL
      A7E3W1, A7YY21
      Conserved Domains (3) summary
      cd00064
      Location:100142
      FU; Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.
      pfam15913
      Location:42144
      Furin-like_2; Furin-like repeat, cysteine-rich
      cl15278
      Location:151208
      TSP_1; Thrombospondin type 1 domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      108267191..108287862
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005204700.5XP_005204757.1  R-spondin-1 isoform X1

      See identical proteins and their annotated locations for XP_005204757.1

      UniProtKB/TrEMBL
      A7E3W1
      Conserved Domains (3) summary
      cd00064
      Location:100142
      FU; Furin-like repeats. Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.
      pfam15913
      Location:42144
      Furin-like_2; Furin-like repeat, cysteine-rich
      cl15278
      Location:151208
      TSP_1; Thrombospondin type 1 domain