U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SORBS2 sorbin and SH3 domain containing 2 [ Bos taurus (cattle) ]

    Gene ID: 614391, updated on 6-Jun-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SORBS2provided by VGNC
    Official Full Name
    sorbin and SH3 domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:106942
    See related
    BGD:BT19201; Ensembl:ENSBTAG00000016486
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    Argbp2
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SORBS2 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 27 NC_037354.1 (15789163..16000827, complement)

    Chromosome 27 - NC_037354.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 110 Neighboring gene PDZ and LIM domain 3 Neighboring gene uncharacterized LOC112444648 Neighboring gene uncharacterized LOC132344049 Neighboring gene toll like receptor 3 Neighboring gene family with sequence similarity 149 member A Neighboring gene transfer RNA cysteine (anticodon GCA)

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037354.1 Chromosome 27 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC157359

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Notch signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    sorbin and SH3 domain-containing protein 2
    Names
    Arg/Abl-interacting protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001372109.1 → NP_001359038.1  sorbin and SH3 domain-containing protein 2

      Status: VALIDATED

      Source sequence(s)
      NKLS02000027
      UniProtKB/TrEMBL
      A0A3Q1M7N6, A0A3Q1MRI6
      Related
      ENSBTAP00000066407.2, ENSBTAT00000078046.2
      Conserved Domains (4) summary
      smart00459
      Location:167 → 217
      Sorb; Sorbin homologous domain
      cd11923
      Location:586 → 642
      SH3_Sorbs2_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 2 (Sorbs2), also called Arg-binding protein 2 (ArgBP2)
      PHA03247
      Location:237 → 457
      PHA03247; large tegument protein UL36; Provisional
      cl17036
      Location:686 → 746
      SH3; Src Homology 3 domain superfamily

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037354.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      15789163..16000827 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059882291.1 → XP_059738274.1  sorbin and SH3 domain-containing protein 2 isoform X21

      UniProtKB/TrEMBL
      A0A3Q1M2E5, A0A3Q1NL10
      Related
      ENSBTAP00000067582.2, ENSBTAT00000083237.2

    2. XM_059882288.1 → XP_059738271.1  sorbin and SH3 domain-containing protein 2 isoform X21

      UniProtKB/TrEMBL
      A0A3Q1M2E5, A0A3Q1NL10

    3. XM_059882292.1 → XP_059738275.1  sorbin and SH3 domain-containing protein 2 isoform X22

      UniProtKB/TrEMBL
      A0A3Q1MRI6
      Related
      ENSBTAP00000058565.2, ENSBTAT00000077382.2

    4. XM_059882287.1 → XP_059738270.1  sorbin and SH3 domain-containing protein 2 isoform X20

    5. XM_059882299.1 → XP_059738282.1  sorbin and SH3 domain-containing protein 2 isoform X29

    6. XM_059882285.1 → XP_059738268.1  sorbin and SH3 domain-containing protein 2 isoform X18

    7. XM_059882293.1 → XP_059738276.1  sorbin and SH3 domain-containing protein 2 isoform X23

      UniProtKB/TrEMBL
      A0A3Q1MRI6

    8. XM_059882295.1 → XP_059738278.1  sorbin and SH3 domain-containing protein 2 isoform X25

      UniProtKB/TrEMBL
      A0A3Q1NDV3, A0AAA9RWS9
      Related
      ENSBTAP00000076930.1, ENSBTAT00000127176.1

    9. XM_059882286.1 → XP_059738269.1  sorbin and SH3 domain-containing protein 2 isoform X19

    10. XM_059882284.1 → XP_059738267.1  sorbin and SH3 domain-containing protein 2 isoform X17

    11. XM_059882289.1 → XP_059738272.1  sorbin and SH3 domain-containing protein 2 isoform X21

      UniProtKB/TrEMBL
      A0A3Q1M2E5, A0A3Q1NL10

    12. XM_059882290.1 → XP_059738273.1  sorbin and SH3 domain-containing protein 2 isoform X21

      UniProtKB/TrEMBL
      A0A3Q1M2E5, A0A3Q1NL10

    13. XM_059882298.1 → XP_059738281.1  sorbin and SH3 domain-containing protein 2 isoform X28

      UniProtKB/TrEMBL
      A0A3Q1NDV3, A0AAA9TK61
      Related
      ENSBTAP00000096645.1, ENSBTAT00000132527.1

    14. XM_059882294.1 → XP_059738277.1  sorbin and SH3 domain-containing protein 2 isoform X24

    15. XM_059882297.1 → XP_059738280.1  sorbin and SH3 domain-containing protein 2 isoform X27

      UniProtKB/TrEMBL
      A0A3Q1NDV3

    16. XM_059882296.1 → XP_059738279.1  sorbin and SH3 domain-containing protein 2 isoform X26

      UniProtKB/TrEMBL
      A0A3Q1NDV3

    17. XM_059882265.1 → XP_059738248.1  sorbin and SH3 domain-containing protein 2 isoform X3

    18. XM_059882270.1 → XP_059738253.1  sorbin and SH3 domain-containing protein 2 isoform X5

    19. XM_059882267.1 → XP_059738250.1  sorbin and SH3 domain-containing protein 2 isoform X5

    20. XM_059882275.1 → XP_059738258.1  sorbin and SH3 domain-containing protein 2 isoform X9

    21. XM_059882268.1 → XP_059738251.1  sorbin and SH3 domain-containing protein 2 isoform X5

    22. XM_059882269.1 → XP_059738252.1  sorbin and SH3 domain-containing protein 2 isoform X5

    23. XM_059882264.1 → XP_059738247.1  sorbin and SH3 domain-containing protein 2 isoform X2

    24. XM_059882259.1 → XP_059738242.1  sorbin and SH3 domain-containing protein 2 isoform X1

    25. XM_059882262.1 → XP_059738245.1  sorbin and SH3 domain-containing protein 2 isoform X1

    26. XM_059882261.1 → XP_059738244.1  sorbin and SH3 domain-containing protein 2 isoform X1

    27. XM_059882263.1 → XP_059738246.1  sorbin and SH3 domain-containing protein 2 isoform X2

    28. XM_059882273.1 → XP_059738256.1  sorbin and SH3 domain-containing protein 2 isoform X7

    29. XM_059882272.1 → XP_059738255.1  sorbin and SH3 domain-containing protein 2 isoform X6

    30. XM_059882266.1 → XP_059738249.1  sorbin and SH3 domain-containing protein 2 isoform X4

    31. XM_059882255.1 → XP_059738238.1  sorbin and SH3 domain-containing protein 2 isoform X1

    32. XM_059882257.1 → XP_059738240.1  sorbin and SH3 domain-containing protein 2 isoform X1

    33. XM_059882256.1 → XP_059738239.1  sorbin and SH3 domain-containing protein 2 isoform X1

    34. XM_059882258.1 → XP_059738241.1  sorbin and SH3 domain-containing protein 2 isoform X1

    35. XM_059882282.1 → XP_059738265.1  sorbin and SH3 domain-containing protein 2 isoform X15

    36. XM_059882280.1 → XP_059738263.1  sorbin and SH3 domain-containing protein 2 isoform X13

    37. XM_059882279.1 → XP_059738262.1  sorbin and SH3 domain-containing protein 2 isoform X13

    38. XM_059882278.1 → XP_059738261.1  sorbin and SH3 domain-containing protein 2 isoform X12

    39. XM_059882274.1 → XP_059738257.1  sorbin and SH3 domain-containing protein 2 isoform X8

    40. XM_059882277.1 → XP_059738260.1  sorbin and SH3 domain-containing protein 2 isoform X11

    41. XM_059882276.1 → XP_059738259.1  sorbin and SH3 domain-containing protein 2 isoform X10

    42. XM_059882281.1 → XP_059738264.1  sorbin and SH3 domain-containing protein 2 isoform X14

    43. XM_059882283.1 → XP_059738266.1  sorbin and SH3 domain-containing protein 2 isoform X16

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001079787.1: Suppressed sequence

      Description
      NM_001079787.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.