U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SNRPC small nuclear ribonucleoprotein polypeptide C [ Bos taurus (cattle) ]

    Gene ID: 614553, updated on 2-Jun-2024

    Summary

    Official Symbol
    SNRPCprovided by VGNC
    Official Full Name
    small nuclear ribonucleoprotein polypeptide Cprovided by VGNC
    Primary source
    VGNC:VGNC:35078
    See related
    BGD:BT16828; Ensembl:ENSBTAG00000024549
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    U1C
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See SNRPC in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (8784910..8795627)

    Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA70 Neighboring gene U7 small nuclear RNA Neighboring gene uncharacterized LOC112443807 Neighboring gene bridge-like lipid transfer protein family member 3A Neighboring gene TATA-box binding protein associated factor 11

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

    Pathways from PubChem

    General gene information

    Clone Names

    • MGC134384

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pre-mRNA 5'-splice site binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in mRNA 5'-splice site recognition IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    U1 small nuclear ribonucleoprotein C
    Names
    U1 snRNP C
    U1 snRNP protein C
    U1-C

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076334.2NP_001069802.1  U1 small nuclear ribonucleoprotein C

      See identical proteins and their annotated locations for NP_001069802.1

      Status: PROVISIONAL

      Source sequence(s)
      BC108201
      UniProtKB/Swiss-Prot
      Q32PA0
      Related
      ENSBTAP00000065451.1, ENSBTAT00000080221.2
      Conserved Domains (1) summary
      pfam06220
      Location:138
      zf-U1; U1 zinc finger

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      8784910..8795627
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)