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    Gm26553 predicted gene, 26553 [ Mus musculus (house mouse) ]

    Gene ID: 74690, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm26553provided by MGI
    Official Full Name
    predicted gene, 26553provided by MGI
    Primary source
    MGI:MGI:5477047
    See related
    AllianceGenome:MGI:5477047
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930459I23Rik
    Summary
    Is expressed in dorsal grey horn and spinal cord. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 5.6) See more
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    Genomic context

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    See Gm26553 in Genome Data Viewer
    Location:
    3; 3 F2.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96256903..96264424, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96349587..96357108, complement)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA glutamine 5 (anticodon CTG) Neighboring gene STARR-seq mESC enhancer starr_08422 Neighboring gene pluripotency associated transcript 30 Neighboring gene nuclear encoded tRNA glutamic acid 3 (anticodon TTC) Neighboring gene nuclear encoded tRNA glycine 5 (anticodon CCC) Neighboring gene U1b1 small nuclear RNA Neighboring gene U1b2 small nuclear RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      96256903..96264424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_375861.3 RNA Sequence

    2. XR_375859.3 RNA Sequence

    3. XR_375860.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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