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    NUP42 nucleoporin 42 [ Bos taurus (cattle) ]

    Gene ID: 515127, updated on 5-Mar-2024

    Summary

    Official Symbol
    NUP42provided by VGNC
    Official Full Name
    nucleoporin 42provided by VGNC
    Primary source
    VGNC:VGNC:32368
    See related
    BGD:BT23725; Ensembl:ENSBTAG00000016014
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    NUPL2
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 4 NC_037331.1 (31829672..31844067)

    Chromosome 4 - NC_037331.1Genomic Context describing neighboring genes Neighboring gene COP9 signalosome complex subunit 8-like Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene kelch like family member 7 Neighboring gene uncharacterized LOC132345075 Neighboring gene glycoprotein nmb Neighboring gene mitochondrial assembly of ribosomal large subunit 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037331.1 Chromosome 4 Reference ARS-UCD2.0 Primary Assembly

    General gene information

    Markers

    Clone Names

    • MGC134117

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables nuclear export signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    nucleoporin NUP42
    Names
    nucleoporin like 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077923.2NP_001071391.1  nucleoporin NUP42

      See identical proteins and their annotated locations for NP_001071391.1

      Status: PROVISIONAL

      Source sequence(s)
      BC110231
      UniProtKB/TrEMBL
      F6QMH3, Q2YDG6
      Related
      ENSBTAP00000021317.5, ENSBTAT00000021317.5
      Conserved Domains (1) summary
      smart00356
      Location:122
      ZnF_C3H1; zinc finger

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037331.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      31829672..31844067
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005205258.5XP_005205315.2  nucleoporin NUP42 isoform X1

      Conserved Domains (1) summary
      smart00356
      Location:122
      ZnF_C3H1; zinc finger