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    CACYBP calcyclin binding protein [ Bos taurus (cattle) ]

    Gene ID: 618428, updated on 6-Jun-2024

    Summary

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    Official Symbol
    CACYBPprovided by VGNC
    Official Full Name
    calcyclin binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:26693
    See related
    BGD:BT27664; Ensembl:ENSBTAG00000001107
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CACYBP in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (56231807..56242613)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 like Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene replication protein A 32 kDa subunit-like Neighboring gene mitochondrial ribosomal protein S14 Neighboring gene tenascin N

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Clone Names

    • MGC127208

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S100 protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heart development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcyclin-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034809.2 → NP_001029981.1  calcyclin-binding protein

      See identical proteins and their annotated locations for NP_001029981.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102091
      UniProtKB/Swiss-Prot
      Q3T168
      UniProtKB/TrEMBL
      A0AAA9TFR3
      Related
      ENSBTAP00000001464.3, ENSBTAT00000001464.4
      Conserved Domains (3) summary
      cd06468
      Location:77 → 169
      p23_CacyBP; p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP). CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter ...
      pfam05002
      Location:184 → 219
      SGS; SGS domain
      pfam09032
      Location:5 → 77
      Siah-Interact_N; Siah interacting protein, N terminal

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      56231807..56242613
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875559.1 → XP_059731542.1  calcyclin-binding protein isoform X1

      UniProtKB/TrEMBL
      A0AAA9SYH6, A0AAA9TFR3
      Related
      ENSBTAP00000090422.1, ENSBTAT00000108149.1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3T168.1 GenPept UniProtKB/Swiss-Prot:Q3T168

    Gene LinkOut

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    Research Materials