U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    NDUFAF5 NADH:ubiquinone oxidoreductase complex assembly factor 5 [ Bos taurus (cattle) ]

    Gene ID: 522230, updated on 8-Jun-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    NDUFAF5provided by VGNC
    Official Full Name
    NADH:ubiquinone oxidoreductase complex assembly factor 5provided by VGNC
    Primary source
    VGNC:VGNC:31957
    See related
    BGD:BT27951; Ensembl:ENSBTAG00000004302
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C13H20orf7
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See NDUFAF5 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (7387046..7412144)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112449246 Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial-like Neighboring gene isthmin 1 Neighboring gene taspase 1 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC112449247 Neighboring gene ESF1 nucleolar pre-rRNA processing protein homolog Neighboring gene SEL1L2 adaptor subunit of ERAD E3 ligase Neighboring gene mono-ADP ribosylhydrolase 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial respiratory chain complex I assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    arginine-hydroxylase NDUFAF5, mitochondrial
    Names
    NADH dehydrogenase (ubiquinone) complex I, assembly factor 5
    NP_001193324.1
    XP_010809332.1
    XP_024856383.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206395.1 → NP_001193324.1  arginine-hydroxylase NDUFAF5, mitochondrial

      See identical proteins and their annotated locations for NP_001193324.1

      Status: VALIDATED

      Source sequence(s)
      BC122720, NKLS02000013
      UniProtKB/TrEMBL
      F1MQP4, Q0IIB7
      Related
      ENSBTAP00000005639.4, ENSBTAT00000005639.6
      Conserved Domains (2) summary
      TIGR02072
      Location:93 → 310
      BioC; malonyl-acyl carrier protein O-methyltransferase BioC
      pfam08241
      Location:94 → 185
      Methyltransf_11; Methyltransferase domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      7387046..7412144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010811030.4 → XP_010809332.1  arginine-hydroxylase NDUFAF5, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LGL1
      Related
      ENSBTAP00000057614.1, ENSBTAT00000074129.2
      Conserved Domains (1) summary
      pfam08241
      Location:94 → 172
      Methyltransf_11; Methyltransferase domain

    2. XM_025000615.2 → XP_024856383.1  arginine-hydroxylase NDUFAF5, mitochondrial isoform X2

      Conserved Domains (1) summary
      cl28099
      Location:2 → 123
      SmtA; SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]

    RNA

    1. XR_009496783.1 RNA Sequence

    2. XR_009496784.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous