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    ZFP2 ZFP2 zinc finger protein [ Homo sapiens (human) ]

    Gene ID: 80108, updated on 5-Mar-2024

    Summary

    Official Symbol
    ZFP2provided by HGNC
    Official Full Name
    ZFP2 zinc finger proteinprovided by HGNC
    Primary source
    HGNC:HGNC:26138
    See related
    Ensembl:ENSG00000198939 AllianceGenome:HGNC:26138
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    zfp-2; ZNF751
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in testis (RPKM 2.5), ovary (RPKM 1.7) and 24 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    5q35.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (178895913..178933212)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (179449179..179486481)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (178322914..178360213)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986493 Neighboring gene zinc finger protein 354B Neighboring gene RNA, U1 small nuclear 39, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 23748 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16726 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 16727 Neighboring gene defective in cullin neddylation 1 domain containing 3 pseudogene Neighboring gene phosphatidylinositol glycan anchor biosynthesis class F pseudogene 1 Neighboring gene ZNF454 divergent transcript Neighboring gene zinc finger protein 454 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_83773 Neighboring gene glutamate metabotropic receptor 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • FLJ21628

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    zinc finger protein ZFP2
    Names
    zinc finger protein 2 homolog
    zinc finger protein 751

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030613.4NP_085116.2  zinc finger protein ZFP2

      See identical proteins and their annotated locations for NP_085116.2

      Status: VALIDATED

      Source sequence(s)
      AK131367, BC132779, BC142989, DA694775, DB059183
      Consensus CDS
      CCDS4440.1
      UniProtKB/Swiss-Prot
      A5PLN5, B7ZM23, Q6ZN57, Q9H6Z6
      Related
      ENSP00000354453.2, ENST00000361362.7
      Conserved Domains (2) summary
      COG5048
      Location:99451
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:384404
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      178895913..178933212
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      179449179..179486481
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)