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    Tmem263 transmembrane protein 263 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 362857, updated on 13-Apr-2024

    Summary

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    Official Symbol
    Tmem263provided by RGD
    Official Full Name
    transmembrane protein 263provided by RGD
    Primary source
    RGD:1563325
    See related
    AllianceGenome:RGD:1563325
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1563325
    Summary
    Predicted to be integral component of membrane. Orthologous to human TMEM263 (transmembrane protein 263). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Muscle (RPKM 120.3), Brain (RPKM 112.3) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    7q13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (20497852..20516011, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (18610151..18628311, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (24647083..24668381, complement)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene sialic acid synthase-like Neighboring gene cryptochrome circadian regulator 1 Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene four and a half LIM domains 4 Neighboring gene uncharacterized LOC134479851

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phosphorylation and degradation of tomosyn-2 de-represses insulin secretion. Bhatnagar S, et al. J Biol Chem, 2014 Sep 5. PMID 25002582, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane protein 263

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108739.2 → NP_001102209.1  transmembrane protein 263

      See identical proteins and their annotated locations for NP_001102209.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000007
      UniProtKB/TrEMBL
      B2RZ08
      Conserved Domains (1) summary
      pfam15475
      Location:24 → 114
      UPF0444; Transmembrane protein C12orf23, UPF0444

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      20497852..20516011 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017594918.3 → XP_017450407.1  transmembrane protein 263 isoform X1

      UniProtKB/TrEMBL
      B2RZ08
      Conserved Domains (1) summary
      pfam15475
      Location:24 → 114
      UPF0444; Transmembrane protein C12orf23, UPF0444
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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