Cdrt4 CMT1A duplicated region transcript 4 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Cdrt4provided by RGD
Official Full Name: CMT1A duplicated region transcript 4provided by RGD
Primary source: RGD:2323961
See related: Ensembl:ENSRNOG00000003294 AllianceGenome:RGD:2323961
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Orthologous to human CDRT4 (CMT1A duplicated region transcript 4). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Restricted expression toward (RPKM 103.8) See more
Orthologs: human mouse all
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Genomic context

Location:: 10q23

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	10	NC_086028.1 (48124695..48156717)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	10	NC_051345.1 (47625470..47657493)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	10	NC_005109.4 (49368183..49400284)

Chromosome 10 - NC_086028.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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General protein information

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Preferred Names: CMT1A duplicated region transcript 4 protein

Names: rCG33447-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001399015.1 → NP_001385944.1 CMT1A duplicated region transcript 4 protein

Status: VALIDATED

Source sequence(s)

JAXUCZ010000010

UniProtKB/TrEMBL

A0A6B9RTF5, A0A9K3Y7D8, F1M3Q7

Related

ENSRNOP00000004392.7, ENSRNOT00000004392.7

Conserved Domains (1) summary

pfam15213
Location:31 → 164

CDRT4; CMT1A duplicated region transcript 4 protein