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    A430010J10Rik RIKEN cDNA A430010J10 gene [ Mus musculus (house mouse) ]

    Gene ID: 319665, updated on 8-Feb-2024

    Summary

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    Official Symbol
    A430010J10Rikprovided by MGI
    Official Full Name
    RIKEN cDNA A430010J10 geneprovided by MGI
    Primary source
    MGI:MGI:2442501
    See related
    AllianceGenome:MGI:2442501
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    6 C1; 6 30.75 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (67134785..67142269)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (67157801..67165108)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA E230016M11 gene Neighboring gene STARR-positive B cell enhancer mm9_chr6:66987352-66987653 Neighboring gene growth arrest and DNA-damage-inducible 45 alpha Neighboring gene predicted gene, 29928 Neighboring gene STARR-seq mESC enhancer starr_16168 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:67078989-67079098 Neighboring gene STARR-seq mESC enhancer starr_16169 Neighboring gene STARR-positive B cell enhancer ABC_E2786 Neighboring gene STARR-seq mESC enhancer starr_16172 Neighboring gene STARR-seq mESC enhancer starr_16173 Neighboring gene predicted gene, 38825 Neighboring gene Sod1 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Global discovery of erythroid long noncoding RNAs reveals novel regulators of red cell maturation. Alvarez-Dominguez JR, et al. Blood, 2014 Jan 23. PMID 24200680, Free PMC Article
    2. Widespread and dynamic translational control of red blood cell development. Alvarez-Dominguez JR, et al. Blood, 2017 Feb 2. PMID 27899360, Free PMC Article
    3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    5. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      67134785..67142269
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_001785270.2 RNA Sequence

    2. XR_001785271.2 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_176975.2: Suppressed sequence

      Description
      NM_176975.2: This RefSeq was permanently suppressed because currently there is insufficient support for the protein.
    Nucleotide Protein Strain
    Heading Accession and Version

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