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    ATL1 atlastin GTPase 1 [ Gallus gallus (chicken) ]

    Gene ID: 423577, updated on 6-Jun-2024

    Summary

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    Official Symbol
    ATL1provided by CGNC
    Official Full Name
    atlastin GTPase 1provided by CGNC
    Primary source
    CGNC:9372
    See related
    Ensembl:ENSGALG00010019334
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SPG3A
    Orthologs
    human mouse all
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    Genomic context

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    See ATL1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (57625769..57655326)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (57500631..57530243)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) Neighboring gene cyclin dependent kinase like 1 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 5 Neighboring gene salvador family WW domain containing protein 1 Neighboring gene ninein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein homooligomerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    atlastin-1
    Names
    spastic paraplegia 3A (autosomal dominant)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      57625769..57655326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046942604.1 → XP_046798560.1  atlastin-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z9J2

    2. XM_015276748.4 → XP_015132234.1  atlastin-1 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RNI5, A0A8V0Z9J2
      Related
      ENSGALP00010027857.1, ENSGALT00010046785.1
      Conserved Domains (1) summary
      pfam02263
      Location:43 → 314
      GBP; Guanylate-binding protein, N-terminal domain

    3. XM_015276747.4 → XP_015132233.1  atlastin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z9J2
      Related
      ENSGALP00010027853.1, ENSGALT00010046778.1
      Conserved Domains (1) summary
      pfam02263
      Location:43 → 314
      GBP; Guanylate-binding protein, N-terminal domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      57500631..57530243
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046919633.1 → XP_046775589.1  atlastin-1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0Z9J2

    2. XM_040672871.2 → XP_040528805.1  atlastin-1 isoform X1

      UniProtKB/TrEMBL
      A0A1L1RNI5, A0A8V0Z9J2
      Conserved Domains (1) summary
      pfam02263
      Location:43 → 314
      GBP; Guanylate-binding protein, N-terminal domain

    3. XM_040672870.2 → XP_040528804.1  atlastin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Z9J2
      Conserved Domains (1) summary
      pfam02263
      Location:43 → 314
      GBP; Guanylate-binding protein, N-terminal domain
    Nucleotide Protein Strain
    Heading Accession and Version

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