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    VCPKMT valosin containing protein lysine methyltransferase [ Gallus gallus (chicken) ]

    Gene ID: 423571, updated on 5-Mar-2024

    Summary

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    Official Symbol
    VCPKMTprovided by CGNC
    Official Full Name
    valosin containing protein lysine methyltransferaseprovided by CGNC
    Primary source
    CGNC:9319
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    METTL21D; C14orf138
    Orthologs
    human mouse all
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    Genomic context

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    See VCPKMT in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (57476117..57479379, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (57351409..57354671, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor 6 Neighboring gene microRNA 1716 Neighboring gene SOS Ras/Rho guanine nucleotide exchange factor 2 Neighboring gene L-2-hydroxyglutarate dehydrogenase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-lysine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-lysine methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein N-lysine methyltransferase METTL21D
    Names
    methyltransferase like 21D
    valosin containing protein lysine (K) methyltransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      57476117..57479379 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_421460.7 → XP_421460.4  protein N-lysine methyltransferase METTL21D isoform X1

    2. XM_004936493.4 → XP_004936550.2  protein N-lysine methyltransferase METTL21D isoform X2

    3. XM_040701812.2 → XP_040557746.2  protein N-lysine methyltransferase METTL21D isoform X3

    RNA

    1. XR_001463717.4 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      57351409..57354671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040672849.2 → XP_040528783.2  protein N-lysine methyltransferase METTL21D isoform X1

    2. XM_040672850.2 → XP_040528784.2  protein N-lysine methyltransferase METTL21D isoform X2

    3. XM_040672851.2 → XP_040528785.2  protein N-lysine methyltransferase METTL21D isoform X3

    RNA

    1. XR_005850543.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials