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    NKD1 naked cuticle homolog 1 [ Gallus gallus (chicken) ]

    Gene ID: 415729, updated on 3-Apr-2024

    Summary

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    Symbol
    NKD1provided by CGNC
    Full Name
    naked cuticle homolog 1provided by CGNC
    Primary source
    CGNC:2755
    See related
    Ensembl:ENSGALG00010024038
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 11
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 11 NC_052542.1 (5882356..5992529, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 11 NC_052583.1 (6223758..6333973, complement)

    Chromosome 11 - NC_052542.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417147 Neighboring gene CYLD lysine 63 deubiquitinase Neighboring gene sorting nexin 20 Neighboring gene uncharacterized LOC121111675 Neighboring gene uncharacterized LOC100859176 Neighboring gene bromodomain containing 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-Wide Association Study of Muscle Glycogen in Jingxing Yellow Chicken. Liu X, et al. Genes (Basel), 2020 Apr 30. PMID 32366026, Free PMC Article
    2. Expression and regulation of Nkd-1, an intracellular component of Wnt signalling pathway in the chick embryo. Schmidt C, et al. Anat Embryol (Berl), 2006 Oct. PMID 16763811

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Genome-Wide Association Study of Muscle Glycogen in Jingxing Yellow Chicken.
      Title: Genome-Wide Association Study of Muscle Glycogen in Jingxing Yellow Chicken.
    2. expression of cNkd-1 is regulated by Wnt expression originating from the neural tube
      Title: Expression and regulation of Nkd-1, an intracellular component of Wnt signalling pathway in the chick embryo.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein naked cuticle homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052542.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5882356..5992529 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025154270.3 → XP_025010038.1  protein naked cuticle homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZXJ2, A0A8V0ZZ67
      Related
      ENSGALP00010035595.1, ENSGALT00010058559.1

    2. XM_015292399.4 → XP_015147885.1  protein naked cuticle homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZZ79

    3. XM_414094.8 → XP_414094.3  protein naked cuticle homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2TWQ4, A0A8V0ZXJ2
      Related
      ENSGALP00010035598.1, ENSGALT00010058564.1

    4. XM_046899710.1 → XP_046755666.1  protein naked cuticle homolog 1 isoform X3

      Related
      ENSGALP00010035605.1, ENSGALT00010058576.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052583.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      6223758..6333973 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040680815.2 → XP_040536749.1  protein naked cuticle homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8V0ZXJ2, A0A8V0ZZ67

    2. XM_040680814.2 → XP_040536748.1  protein naked cuticle homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZZ79

    3. XM_040680813.2 → XP_040536747.1  protein naked cuticle homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2TWQ4, A0A8V0ZXJ2

    4. XM_046925746.1 → XP_046781702.1  protein naked cuticle homolog 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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