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    PIPOX pipecolic acid and sarcosine oxidase [ Canis lupus familiaris (dog) ]

    Gene ID: 491177, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PIPOXprovided by VGNC
    Official Full Name
    pipecolic acid and sarcosine oxidaseprovided by VGNC
    Primary source
    VGNC:VGNC:44578
    See related
    Ensembl:ENSCAFG00845009717
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (43933328..44029372)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (42270936..42367312)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (43087750..43184119)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (42801125..42812862)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (43008746..43105371)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene flotillin 2 Neighboring gene dehydrogenase/reductase 13 Neighboring gene PHD finger protein 12 Neighboring gene seizure related 6 homolog Neighboring gene uncharacterized LOC119873329 Neighboring gene uncharacterized LOC111097447 Neighboring gene myosin XVIIIA Neighboring gene uncharacterized LOC106559316

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-pipecolate oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sarcosine oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-lysine catabolic process to acetyl-CoA via L-pipecolate IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxisomal sarcosine oxidase; LOW QUALITY PROTEIN: peroxisomal sarcosine oxidase
    XP_005624933.1
    XP_022279064.1
    XP_038342386.1
    XP_038404227.1
    XP_038404228.1
    XP_038404229.1
    XP_038404230.1
    XP_038404231.1
    XP_038404232.1
    XP_038467112.1
    XP_038467122.1
    XP_038467130.1
    XP_038468188.1
    XP_038468189.1
    XP_038468190.1
    XP_038468191.1
    XP_038468192.1
    XP_038468193.1
    XP_038533449.1
    XP_038533450.1
    XP_038533451.1
    XP_038533452.1
    XP_038533453.1
    XP_038533454.1
    XP_548297.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      43933328..44029372
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038677526.1 → XP_038533454.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    2. XM_038677525.1 → XP_038533453.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    3. XM_038677524.1 → XP_038533452.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    4. XM_038677522.1 → XP_038533450.1  peroxisomal sarcosine oxidase isoform X2

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 371
      soxA_mon; sarcosine oxidase, monomeric form

    5. XM_038677521.1 → XP_038533449.1  peroxisomal sarcosine oxidase isoform X1

      UniProtKB/TrEMBL
      A0A8C0KEX0, A0A8C0MVR2, A0A8C0TJ79, A0A8I3NCN7
      Related
      ENSCAFP00845013371.1, ENSCAFT00845017162.1
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 390
      soxA_mon; sarcosine oxidase, monomeric form

    6. XM_038677523.1 → XP_038533451.1  peroxisomal sarcosine oxidase isoform X3

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      42801125..42812862
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038486458.1 → XP_038342386.1  LOW QUALITY PROTEIN: peroxisomal sarcosine oxidase isoform X1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      43008746..43105371
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038612265.1 → XP_038468193.1  peroxisomal sarcosine oxidase isoform X4

      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    2. XM_038612264.1 → XP_038468192.1  peroxisomal sarcosine oxidase isoform X4

      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    3. XM_038612263.1 → XP_038468191.1  peroxisomal sarcosine oxidase isoform X4

      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    4. XM_038612261.1 → XP_038468189.1  peroxisomal sarcosine oxidase isoform X2

      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 371
      soxA_mon; sarcosine oxidase, monomeric form

    5. XM_038612260.1 → XP_038468188.1  peroxisomal sarcosine oxidase isoform X1

      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 390
      soxA_mon; sarcosine oxidase, monomeric form

    6. XM_038612262.1 → XP_038468190.1  peroxisomal sarcosine oxidase isoform X3

      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      43087750..43184119
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038548304.1 → XP_038404232.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    2. XM_038548303.1 → XP_038404231.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    3. XM_038548302.1 → XP_038404230.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    4. XM_038548300.1 → XP_038404228.1  peroxisomal sarcosine oxidase isoform X2

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 371
      soxA_mon; sarcosine oxidase, monomeric form

    5. XM_038548299.1 → XP_038404227.1  peroxisomal sarcosine oxidase isoform X1

      UniProtKB/TrEMBL
      A0A8C0KEX0, A0A8C0MVR2, A0A8C0TJ79, A0A8I3NCN7
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 390
      soxA_mon; sarcosine oxidase, monomeric form

    6. XM_038548301.1 → XP_038404229.1  peroxisomal sarcosine oxidase isoform X3

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      42270936..42367312
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038611202.1 → XP_038467130.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    2. XM_038611194.1 → XP_038467122.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    3. XM_038611184.1 → XP_038467112.1  peroxisomal sarcosine oxidase isoform X4

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:1 → 324
      soxA_mon; sarcosine oxidase, monomeric form

    4. XM_005624876.4 → XP_005624933.1  peroxisomal sarcosine oxidase isoform X2

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 371
      soxA_mon; sarcosine oxidase, monomeric form

    5. XM_548297.7 → XP_548297.2  peroxisomal sarcosine oxidase isoform X1

      UniProtKB/TrEMBL
      A0A8C0KEX0, A0A8C0MVR2, A0A8C0TJ79, A0A8I3NCN7
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 390
      soxA_mon; sarcosine oxidase, monomeric form

    6. XM_022423356.2 → XP_022279064.1  peroxisomal sarcosine oxidase isoform X3

      UniProtKB/TrEMBL
      A0A8C0TJ79
      Conserved Domains (1) summary
      TIGR01377
      Location:9 → 324
      soxA_mon; sarcosine oxidase, monomeric form
    Nucleotide Protein
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