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    APOH apolipoprotein H [ Canis lupus familiaris (dog) ]

    Gene ID: 403945, updated on 4-Apr-2024

    Summary

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    Official Symbol
    APOHprovided by VGNC
    Official Full Name
    apolipoprotein Hprovided by VGNC
    Primary source
    VGNC:VGNC:38004
    See related
    Ensembl:ENSCAFG00845028150
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (15744714..15757283)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (14976443..14988978)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (12830254..12842800, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (14691324..14703853)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (12829414..12841962, complement)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene protein kinase C alpha Neighboring gene alanine and glycine-rich protein-like Neighboring gene uncharacterized LOC119873256 Neighboring gene centrosomal protein 112 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111097327

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evaluation of the APOH gene as a positional candidate for prcd in dogs. Gu W, et al. Invest Ophthalmol Vis Sci, 1999 May. PMID 10235557
    2. Characterization and acute phase modulation of canine apolipoprotein H (beta 2-glycoprotein I). Sellar GC, et al. Biochem Biophys Res Commun, 1993 Mar 31. PMID 7682067

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    beta-2-glycoprotein 1
    Names
    B2GPI
    apo-H
    beta(2)GPI
    beta-2-glycoprotein I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003265.2 → NP_001003265.1  beta-2-glycoprotein 1 precursor

      See identical proteins and their annotated locations for NP_001003265.1

      Status: PROVISIONAL

      Source sequence(s)
      X72933
      UniProtKB/Swiss-Prot
      P33703
      UniProtKB/TrEMBL
      A0A8C0LLF4, A0A8C0LW15
      Related
      ENSCAFP00845038964.1, ENSCAFT00845049681.1
      Conserved Domains (2) summary
      pfam09014
      Location:261 → 345
      Sushi_2; Beta-2-glycoprotein-1 fifth domain
      cl27761
      Location:41 → 260
      CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      15744714..15757283
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      14691324..14703853
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      12829414..12841962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      12830254..12842800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      14976443..14988978
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P33703.1 GenPept UniProtKB/Swiss-Prot:P33703

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