U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ERCC6L2 ERCC excision repair 6 like 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 476297, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ERCC6L2provided by VGNC
    Official Full Name
    ERCC excision repair 6 like 2provided by VGNC
    Primary source
    VGNC:VGNC:97192
    See related
    Ensembl:ENSCAFG00845003753
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (71094863..71216795, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (71556932..71681271, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (71380405..71505183, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (70905183..71035451, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (70669817..70792128, complement)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102151543 Neighboring gene 60S ribosomal protein L21-like Neighboring gene uncharacterized LOC111096339 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC119870809 Neighboring gene uncharacterized LOC111096340 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111090717

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA excision repair protein ERCC-6-like 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      71094863..71216795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038654944.1 → XP_038510872.1  DNA excision repair protein ERCC-6-like 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q1T4, A0A8I3MVY8, A0A8P0PR86
      Related
      ENSCAFP00845005396.1, ENSCAFT00845006784.1
      Conserved Domains (3) summary
      COG0553
      Location:15 → 619
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1089 → 1113
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    2. XM_038654943.1 → XP_038510871.1  DNA excision repair protein ERCC-6-like 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MYQ4, A0A8I3MQ76, A0A8P0TUV1
      Related
      ENSCAFP00845005376.1, ENSCAFT00845006759.1
      Conserved Domains (3) summary
      COG0553
      Location:15 → 651
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1121 → 1145
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    3. XM_038654945.1 → XP_038510873.1  DNA excision repair protein ERCC-6-like 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0MYQ4
      Conserved Domains (3) summary
      COG0553
      Location:1 → 453
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      pfam14773
      Location:923 → 947
      VIGSSK; Helicase-associated putative binding domain, C-terminal
      cl28899
      Location:1 → 173
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    RNA

    1. XR_005421476.1 RNA Sequence

    2. XR_005421477.1 RNA Sequence

    3. XR_005421478.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      70905183..71035451 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038466160.1 → XP_038322088.1  DNA excision repair protein ERCC-6-like 2 isoform X2

      Conserved Domains (3) summary
      COG0553
      Location:15 → 619
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1089 → 1113
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    2. XM_038466159.1 → XP_038322087.1  DNA excision repair protein ERCC-6-like 2 isoform X1

      Conserved Domains (3) summary
      COG0553
      Location:15 → 651
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1121 → 1145
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    3. XM_038466161.1 → XP_038322089.1  DNA excision repair protein ERCC-6-like 2 isoform X3

      Conserved Domains (3) summary
      COG0553
      Location:1 → 453
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      pfam14773
      Location:923 → 947
      VIGSSK; Helicase-associated putative binding domain, C-terminal
      cl28899
      Location:1 → 173
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    RNA

    1. XR_005320288.1 RNA Sequence

    2. XR_005320289.1 RNA Sequence

    3. XR_005320290.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      70669817..70792128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038591148.1 → XP_038447076.1  DNA excision repair protein ERCC-6-like 2 isoform X2

      Conserved Domains (3) summary
      COG0553
      Location:15 → 619
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1089 → 1113
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    2. XM_038591147.1 → XP_038447075.1  DNA excision repair protein ERCC-6-like 2 isoform X1

      Conserved Domains (3) summary
      COG0553
      Location:15 → 651
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1121 → 1145
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    3. XM_038591149.1 → XP_038447077.1  DNA excision repair protein ERCC-6-like 2 isoform X3

      Conserved Domains (3) summary
      COG0553
      Location:1 → 453
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      pfam14773
      Location:923 → 947
      VIGSSK; Helicase-associated putative binding domain, C-terminal
      cl28899
      Location:1 → 173
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    RNA

    1. XR_005388515.1 RNA Sequence

    2. XR_005388516.1 RNA Sequence

    3. XR_005388517.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      71380405..71505183 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038526849.1 → XP_038382777.1  DNA excision repair protein ERCC-6-like 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q1T4, A0A8I3MVY8, A0A8P0PR86
      Conserved Domains (3) summary
      COG0553
      Location:15 → 619
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1089 → 1113
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    2. XM_038526848.1 → XP_038382776.1  DNA excision repair protein ERCC-6-like 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MYQ4, A0A8I3MQ76, A0A8P0TUV1
      Conserved Domains (3) summary
      COG0553
      Location:15 → 651
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1121 → 1145
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    3. XM_038526850.1 → XP_038382778.1  DNA excision repair protein ERCC-6-like 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0MYQ4
      Conserved Domains (3) summary
      COG0553
      Location:1 → 453
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      pfam14773
      Location:923 → 947
      VIGSSK; Helicase-associated putative binding domain, C-terminal
      cl28899
      Location:1 → 173
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    RNA

    1. XR_005353948.1 RNA Sequence

    2. XR_005353949.1 RNA Sequence

    3. XR_005353950.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      71556932..71681271 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561762.1 → XP_038417690.1  DNA excision repair protein ERCC-6-like 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q1T4, A0A8I3MVY8, A0A8P0PR86
      Conserved Domains (3) summary
      COG0553
      Location:15 → 619
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1089 → 1113
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    2. XM_014117189.3 → XP_013972664.3  DNA excision repair protein ERCC-6-like 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MYQ4, A0A8I3MQ76, A0A8P0TUV1
      Conserved Domains (3) summary
      COG0553
      Location:15 → 651
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      cd18005
      Location:123 → 371
      DEXHc_ERCC6L2; DEXH-box helicase domain of ERCC6L2
      pfam14773
      Location:1121 → 1145
      VIGSSK; Helicase-associated putative binding domain, C-terminal

    3. XM_038561825.1 → XP_038417753.1  DNA excision repair protein ERCC-6-like 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0MYQ4
      Conserved Domains (3) summary
      COG0553
      Location:1 → 453
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
      pfam14773
      Location:923 → 947
      VIGSSK; Helicase-associated putative binding domain, C-terminal
      cl28899
      Location:1 → 173
      DEAD-like_helicase_N; N-terminal helicase domain of the DEAD-box helicase superfamily

    RNA

    1. XR_005372642.1 RNA Sequence

    2. XR_005372664.1 RNA Sequence

    3. XR_005372680.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous