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    Itpripl2 inositol 1,4,5-triphosphate receptor interacting protein-like 2 [ Mus musculus (house mouse) ]

    Gene ID: 319622, updated on 5-Mar-2024

    Summary

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    Official Symbol
    Itpripl2provided by MGI
    Official Full Name
    inositol 1,4,5-triphosphate receptor interacting protein-like 2provided by MGI
    Primary source
    MGI:MGI:2442416
    See related
    Ensembl:ENSMUSG00000095115 AllianceGenome:MGI:2442416
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C130081G24; E030018N11Rik
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in genitourinary system. Orthologous to human ITPRIPL2 (ITPRIP like 2). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    human all
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    Genomic context

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    Location:
    7 F1; 7 63.44 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (118084334..118091198, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (118485111..118491975, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene C-type lectin domain containing 19A pseudogene Neighboring gene synaptotagmin XVII Neighboring gene STARR-seq mESC enhancer starr_20004 Neighboring gene STARR-seq mESC enhancer starr_20005 Neighboring gene STARR-seq mESC enhancer starr_20007 Neighboring gene predicted gene, 51516 Neighboring gene demethyl-Q 7 Neighboring gene STARR-positive B cell enhancer ABC_E1093

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GUDMAP: the genitourinary developmental molecular anatomy project. McMahon AP, et al. J Am Soc Nephrol, 2008 Apr. PMID 18287559
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Variation

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    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    inositol 1,4,5-trisphosphate receptor-interacting protein-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033380.3 → NP_001028552.1  inositol 1,4,5-trisphosphate receptor-interacting protein-like 2 precursor

      See identical proteins and their annotated locations for NP_001028552.1

      Status: VALIDATED

      Source sequence(s)
      AA182221, AC122912, AK137678
      Consensus CDS
      CCDS52373.1
      UniProtKB/Swiss-Prot
      B2RX24, Q3UE60, Q3UV16
      Related
      ENSMUSP00000136409.2, ENSMUST00000178344.3
      Conserved Domains (1) summary
      pfam03281
      Location:163 → 496
      Mab-21; Mab-21 protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      118084334..118091198 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3UV16.1 GenPept UniProtKB/Swiss-Prot:Q3UV16

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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