U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZFYVE1 zinc finger FYVE-type containing 1 [ Bos taurus (cattle) ]

    Gene ID: 537916, updated on 6-Jun-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ZFYVE1provided by VGNC
    Official Full Name
    zinc finger FYVE-type containing 1provided by VGNC
    Primary source
    VGNC:VGNC:37173
    See related
    BGD:BT16450; Ensembl:ENSBTAG00000011041
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZFYVE1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (84486398..84531241, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene double PHD fingers 3 Neighboring gene uncharacterized LOC101902531 Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene DDB1 and CUL4 associated factor 4 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene RNA binding motif protein 25

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger FYVE domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206112.1 → NP_001193041.1  zinc finger FYVE domain-containing protein 1

      See identical proteins and their annotated locations for NP_001193041.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000010
      UniProtKB/TrEMBL
      A0AAF6DMD4, E1BPK7, G3N025
      Related
      ENSBTAP00000014664.6, ENSBTAT00000014664.7
      Conserved Domains (3) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:594 → 655
      PHD_SF; PHD finger superfamily

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      84486398..84531241 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005212011.5 → XP_005212068.1  zinc finger FYVE domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005212068.1

      UniProtKB/TrEMBL
      A0AAF6DMD4, E1BPK7, G3N025
      Conserved Domains (3) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:594 → 655
      PHD_SF; PHD finger superfamily

    2. XM_010809489.4 → XP_010807791.1  zinc finger FYVE domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_010807791.1

      UniProtKB/TrEMBL
      A0AAF6DMD4, E1BPK7, G3N025
      Conserved Domains (3) summary
      cd01851
      Location:174 → 410
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:711 → 771
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:594 → 655
      PHD_SF; PHD finger superfamily

    RNA

    1. XR_009496059.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials