U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    SH2D5 SH2 domain containing 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717509, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    SH2D5provided by VGNC
    Official Full Name
    SH2 domain containing 5provided by VGNC
    Primary source
    VGNC:VGNC:77324
    See related
    Ensembl:ENSMMUG00000008847
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SH2D5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (203979597..203994364)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (19528482..19541446, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4 gamma 3 Neighboring gene U7 small nuclear RNA Neighboring gene heterochromatin protein 1 binding protein 3 Neighboring gene uncharacterized LOC114673957 Neighboring gene kinesin family member 17 Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    SH2 domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266317.1 → NP_001253246.1  SH2 domain-containing protein 5

      See identical proteins and their annotated locations for NP_001253246.1

      Status: PROVISIONAL

      Source sequence(s)
      JU334486
      UniProtKB/TrEMBL
      A0A5K1TY50, G7MHE4
      Related
      ENSMMUP00000011603.4, ENSMMUT00000012371.4
      Conserved Domains (2) summary
      cd00173
      Location:300 → 376
      SH2; Src homology 2 (SH2) domain
      cd13157
      Location:23 → 150
      PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      203979597..203994364
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015129374.2 → XP_014984860.2  SH2 domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F7DZ09, G7MHE4, H9FUD0
      Conserved Domains (2) summary
      cd00173
      Location:300 → 376
      SH2; Src homology 2 (SH2) domain
      cd13157
      Location:23 → 150
      PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

    2. XM_028845850.1 → XP_028701683.1  SH2 domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F7DZ09, G7MHE4, H9FUD0
      Conserved Domains (2) summary
      cd00173
      Location:300 → 376
      SH2; Src homology 2 (SH2) domain
      cd13157
      Location:23 → 150
      PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

    3. XM_028845854.1 → XP_028701687.1  SH2 domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F7DZ09, G7MHE4, H9FUD0
      Conserved Domains (2) summary
      cd00173
      Location:300 → 376
      SH2; Src homology 2 (SH2) domain
      cd13157
      Location:23 → 150
      PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

    4. XM_028845855.1 → XP_028701688.1  SH2 domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F7DZ09, G7MHE4, H9FUD0
      Conserved Domains (2) summary
      cd00173
      Location:300 → 376
      SH2; Src homology 2 (SH2) domain
      cd13157
      Location:23 → 150
      PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain

    5. XM_015129315.2 → XP_014984801.2  SH2 domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      F7DZ09, G7MHE4, H9FUD0
      Conserved Domains (2) summary
      cd00173
      Location:300 → 376
      SH2; Src homology 2 (SH2) domain
      cd13157
      Location:23 → 150
      PTB_tensin-related; Tensin-related Phosphotyrosine-binding (PTB) domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Miscellaneous