Tram1l1 translocation associated membrane protein 1-like 1 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tram1l1provided by RGD
Official Full Name: translocation associated membrane protein 1-like 1provided by RGD
Primary source: RGD:1306398
See related: AllianceGenome:RGD:1306398
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary: Predicted to be involved in protein insertion into ER membrane. Predicted to be integral component of endoplasmic reticulum membrane. Orthologous to human TRAM1L1 (translocation associated membrane protein 1 like 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: 2q42

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	2	NC_086020.1 (215195665..215197846)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	2	NC_051337.1 (212511130..212513311)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	2	NC_005101.4 (228544418..228546599)

Chromosome 2 - NC_086020.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in protein insertion into ER membrane	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in endoplasmic reticulum membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: translocating chain-associated membrane protein 1-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001107724.1 → NP_001101194.1 translocating chain-associated membrane protein 1-like 1

See identical proteins and their annotated locations for NP_001101194.1

Status: PROVISIONAL

Source sequence(s)

CH473952

UniProtKB/TrEMBL

A6HVJ9

Conserved Domains (2) summary

smart00724
Location:116 → 324

TLC; TRAM, LAG1 and CLN8 homology domains

pfam08390
Location:50 → 114

TRAM1; TRAM1-like protein