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    TTC28 tetratricopeptide repeat domain 28 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 717025, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TTC28provided by VGNC
    Official Full Name
    tetratricopeptide repeat domain 28provided by VGNC
    Primary source
    VGNC:VGNC:79785
    See related
    Ensembl:ENSMMUG00000001058
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 10 NC_041763.1 (22867501..23587419)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 10 NC_027902.1 (69764737..70532679, complement)

    Chromosome 10 - NC_041763.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 117 Neighboring gene HscB mitochondrial iron-sulfur cluster cochaperone Neighboring gene checkpoint kinase 2 Neighboring gene uncharacterized LOC114670379 Neighboring gene phosphatidylinositol transfer protein beta Neighboring gene MN1 proto-oncogene, transcriptional regulator

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetratricopeptide repeat protein 28
    XP_015005463.1
    XP_028683732.1
    XP_028683733.1
    XP_028683734.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041763.1 Reference Mmul_10 Primary Assembly

      Range
      22867501..23587419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028827899.1 → XP_028683732.1  tetratricopeptide repeat protein 28 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A1J2
      Conserved Domains (5) summary
      TIGR02917
      Location:47 → 969
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:91 → 121
      TPR; TPR repeat [structural motif]
      pfam05109
      Location:2120 → 2368
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam12770
      Location:1422 → 1745
      CHAT; CHAT domain
      pfam13424
      Location:989 → 1061
      TPR_12; Tetratricopeptide repeat

    2. XM_028827900.1 → XP_028683733.1  tetratricopeptide repeat protein 28 isoform X2

      UniProtKB/TrEMBL
      A0A1D5Q715
      Conserved Domains (5) summary
      TIGR02917
      Location:47 → 969
      PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
      sd00006
      Location:91 → 121
      TPR; TPR repeat [structural motif]
      pfam05109
      Location:2112 → 2360
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam12770
      Location:1422 → 1745
      CHAT; CHAT domain
      pfam13424
      Location:989 → 1061
      TPR_12; Tetratricopeptide repeat

    3. XM_015149977.2 → XP_015005463.1  tetratricopeptide repeat protein 28 isoform X3

      UniProtKB/TrEMBL
      A0A5F8A1J2, F6QN66
      Related
      ENSMMUP00000001417.2, ENSMMUT00000001506.4
      Conserved Domains (8) summary
      smart00028
      Location:394 → 426
      TPR; Tetratricopeptide repeats
      COG0457
      Location:694 → 995
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:91 → 121
      TPR; TPR repeat [structural motif]
      pfam11914
      Location:2197 → 2285
      DUF3432; Domain of unknown function (DUF3432)
      pfam12770
      Location:1390 → 1713
      CHAT; CHAT domain
      pfam13176
      Location:959 → 994
      TPR_7; Tetratricopeptide repeat
      pfam13414
      Location:94 → 157
      TPR_11; TPR repeat
      pfam13424
      Location:315 → 386
      TPR_12; Tetratricopeptide repeat

    4. XM_028827901.1 → XP_028683734.1  tetratricopeptide repeat protein 28 isoform X4

      UniProtKB/TrEMBL
      A0A5F8A1J2
      Related
      ENSMMUP00000071787.1, ENSMMUT00000086200.1
      Conserved Domains (5) summary
      COG0457
      Location:608 → 909
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:508 → 536
      TPR; TPR repeat [structural motif]
      pfam05109
      Location:2002 → 2250
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam12770
      Location:1304 → 1627
      CHAT; CHAT domain
      pfam13424
      Location:271 → 340
      TPR_12; Tetratricopeptide repeat
    Nucleotide Protein
    Heading Accession and Version

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