U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ALKBH8 alkB homolog 8, tRNA methyltransferase [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 706917, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ALKBH8provided by VGNC
    Official Full Name
    alkB homolog 8, tRNA methyltransferaseprovided by VGNC
    Primary source
    VGNC:VGNC:99541
    See related
    Ensembl:ENSMMUG00000005437
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ALKBH8 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (100750213..100816424, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (100429016..100488374, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106993460 Neighboring gene CWF19 like cell cycle control factor 2 Neighboring gene uncharacterized LOC114672388 Neighboring gene ELMO domain containing 1 Neighboring gene sarcolipin

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 2-oxoglutarate-dependent dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA wobble uridine modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    alkylated DNA repair protein alkB homolog 8
    Names
    alkB, alkylation repair homolog 8
    XP_028689769.1
    XP_028689770.1
    XP_028689771.1
    XP_028689772.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      100750213..100816424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028833936.1 → XP_028689769.1  alkylated DNA repair protein alkB homolog 8

      UniProtKB/TrEMBL
      A0A1D5QHE1, F7GQ60, H9EWG3
      Related
      ENSMMUP00000047462.2, ENSMMUT00000063012.2
      Conserved Domains (4) summary
      pfam09004
      Location:1 → 37
      DUF1891; Domain of unknown function (DUF1891)
      cd12431
      Location:42 → 122
      RRM_ALKBH8; RNA recognition motif in alkylated DNA repair protein alkB homolog 8 (ALKBH8) and similar proteins
      pfam13649
      Location:410 → 497
      Methyltransf_25; Methyltransferase domain
      cl21496
      Location:152 → 334
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    2. XM_028833939.1 → XP_028689772.1  alkylated DNA repair protein alkB homolog 8

      UniProtKB/TrEMBL
      A0A1D5QHE1, F7GQ60, H9EWG3
      Related
      ENSMMUP00000007185.4, ENSMMUT00000007650.4
      Conserved Domains (4) summary
      pfam09004
      Location:1 → 37
      DUF1891; Domain of unknown function (DUF1891)
      cd12431
      Location:42 → 122
      RRM_ALKBH8; RNA recognition motif in alkylated DNA repair protein alkB homolog 8 (ALKBH8) and similar proteins
      pfam13649
      Location:410 → 497
      Methyltransf_25; Methyltransferase domain
      cl21496
      Location:152 → 334
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    3. XM_028833937.1 → XP_028689770.1  alkylated DNA repair protein alkB homolog 8

      UniProtKB/TrEMBL
      A0A1D5QHE1, F7GQ60, H9EWG3
      Conserved Domains (4) summary
      pfam09004
      Location:1 → 37
      DUF1891; Domain of unknown function (DUF1891)
      cd12431
      Location:42 → 122
      RRM_ALKBH8; RNA recognition motif in alkylated DNA repair protein alkB homolog 8 (ALKBH8) and similar proteins
      pfam13649
      Location:410 → 497
      Methyltransf_25; Methyltransferase domain
      cl21496
      Location:152 → 334
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    4. XM_028833938.1 → XP_028689771.1  alkylated DNA repair protein alkB homolog 8

      UniProtKB/TrEMBL
      A0A1D5QHE1, F7GQ60, H9EWG3
      Related
      ENSMMUP00000007187.4, ENSMMUT00000007652.4
      Conserved Domains (4) summary
      pfam09004
      Location:1 → 37
      DUF1891; Domain of unknown function (DUF1891)
      cd12431
      Location:42 → 122
      RRM_ALKBH8; RNA recognition motif in alkylated DNA repair protein alkB homolog 8 (ALKBH8) and similar proteins
      pfam13649
      Location:410 → 497
      Methyltransf_25; Methyltransferase domain
      cl21496
      Location:152 → 334
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.