U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PBX1 PBX homeobox 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 694416, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PBX1provided by VGNC
    Official Full Name
    PBX homeobox 1provided by VGNC
    Primary source
    VGNC:VGNC:75770
    See related
    Ensembl:ENSMMUG00000019108
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (22042931..22373391)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (202773805..203104064, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene histone H3.3C-like Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene microRNA mir-7177 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L35a-like Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in animal organ morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in embryonic organ development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in eye development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    pre-B-cell leukemia transcription factor 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      22042931..22373391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015125589.2 → XP_014981075.1  pre-B-cell leukemia transcription factor 1 isoform X4

      Conserved Domains (2) summary
      cd00086
      Location:234 → 294
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03792
      Location:40 → 232
      PBC; PBC domain

    2. XM_028849923.1 → XP_028705756.1  pre-B-cell leukemia transcription factor 1 isoform X4

      Conserved Domains (2) summary
      cd00086
      Location:234 → 294
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03792
      Location:40 → 232
      PBC; PBC domain

    3. XM_015125575.2 → XP_014981061.1  pre-B-cell leukemia transcription factor 1 isoform X1

      UniProtKB/TrEMBL
      F6WM30, G7MF72, H9FV44
      Related
      ENSMMUP00000014901.3, ENSMMUT00000015900.4
      Conserved Domains (2) summary
      cd00086
      Location:234 → 294
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03792
      Location:40 → 232
      PBC; PBC domain

    4. XM_028849909.1 → XP_028705742.1  pre-B-cell leukemia transcription factor 1 isoform X1

      UniProtKB/TrEMBL
      F6WM30, G7MF72, H9FV44
      Conserved Domains (2) summary
      cd00086
      Location:234 → 294
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03792
      Location:40 → 232
      PBC; PBC domain

    5. XM_015125583.2 → XP_014981069.1  pre-B-cell leukemia transcription factor 1 isoform X2

      UniProtKB/TrEMBL
      G7MF72
      Conserved Domains (2) summary
      cd00086
      Location:234 → 294
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03792
      Location:40 → 232
      PBC; PBC domain

    6. XM_015125593.2 → XP_014981079.1  pre-B-cell leukemia transcription factor 1 isoform X4

      Conserved Domains (2) summary
      cd00086
      Location:234 → 294
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03792
      Location:40 → 232
      PBC; PBC domain

    7. XM_028849918.1 → XP_028705751.1  pre-B-cell leukemia transcription factor 1 isoform X3

      UniProtKB/TrEMBL
      G7MF72
      Conserved Domains (2) summary
      cd00086
      Location:205 → 265
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      pfam03792
      Location:57 → 203
      PBC; PBC domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Miscellaneous