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    STRN striatin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 708491, updated on 5-Mar-2024

    Summary

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    Official Symbol
    STRNprovided by VGNC
    Official Full Name
    striatinprovided by VGNC
    Primary source
    VGNC:VGNC:78039
    See related
    Ensembl:ENSMMUG00000002521
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 13 NC_041766.1 (71951422..72080825)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 13 NC_027905.1 (37298700..37430492, complement)

    Chromosome 13 - NC_041766.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114671738 Neighboring gene G-patch domain containing 11 Neighboring gene HEAT repeat containing 5B Neighboring gene 40S ribosomal protein S8 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene vitrin Neighboring gene fasciculation and elongation protein zeta 2 Neighboring gene cysteine rich transmembrane BMP regulator 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables armadillo repeat domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase 2A binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein-containing complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    striatin
    Names
    striatin, calmodulin binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041766.1 Reference Mmul_10 Primary Assembly

      Range
      71951422..72080825
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028831763.1 → XP_028687596.1  striatin isoform X1

      UniProtKB/TrEMBL
      F6YB73, F7C5P0
      Related
      ENSMMUP00000036615.3, ENSMMUT00000043619.3
      Conserved Domains (3) summary
      cd00200
      Location:488 → 812
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:501 → 547
      7WD40; WD40 repeat [structural motif]
      pfam08232
      Location:52 → 177
      Striatin; Striatin family

    2. XM_015112104.2 → XP_014967590.1  striatin isoform X2

      UniProtKB/TrEMBL
      F6YB92, F7C5P0
      Related
      ENSMMUP00000036614.3, ENSMMUT00000043618.3
      Conserved Domains (4) summary
      COG2319
      Location:433 → 777
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:459 → 783
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam08232
      Location:52 → 177
      Striatin; Striatin family
      sd00039
      Location:472 → 518
      7WD40; WD40 repeat [structural motif]

    3. XM_028831764.1 → XP_028687597.1  striatin isoform X3

      UniProtKB/TrEMBL
      H9F8Q7
      Conserved Domains (2) summary
      cd00200
      Location:331 → 655
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:344 → 390
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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