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    Rgs19 regulator of G-protein signaling 19 [ Mus musculus (house mouse) ]

    Gene ID: 56470, updated on 8-May-2024

    Summary

    Official Symbol
    Rgs19provided by MGI
    Official Full Name
    regulator of G-protein signaling 19provided by MGI
    Primary source
    MGI:MGI:1915153
    See related
    Ensembl:ENSMUSG00000002458 AllianceGenome:MGI:1915153
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GAIP; 2610042F04Rik
    Summary
    Predicted to enable G-protein alpha-subunit binding activity. Predicted to act upstream of or within negative regulation of signal transduction. Predicted to be located in brush border; clathrin-coated vesicle; and membrane raft. Is expressed in embryo; forelimb bud; palatal shelf epithelium; and primary palate epithelium. Orthologous to human RGS19 (regulator of G protein signaling 19). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in spleen adult (RPKM 53.3), thymus adult (RPKM 37.4) and 27 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Rgs19 in Genome Data Viewer
    Location:
    2 H4; 2 103.72 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (181330212..181336330, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (181688419..181694537, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene SRY (sex determining region Y)-box 18 Neighboring gene transcription elongation factor A (SII), 2 Neighboring gene LKAAEAR motif containing 1 (IKAAEAR murine motif) Neighboring gene STARR-positive B cell enhancer mm9_chr2:181441345-181441645 Neighboring gene opioid receptor-like 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G-protein alpha-subunit binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in brush border ISO
    Inferred from Sequence Orthology
    more info
     
    located_in clathrin-coated vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    regulator of G-protein signaling 19
    Names
    G-alpha interacting protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001291205.1NP_001278134.1  regulator of G-protein signaling 19 isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longest isoform (a).
      Source sequence(s)
      AK042531, AL844529, BY540555
      Consensus CDS
      CCDS71223.1
      UniProtKB/TrEMBL
      B7ZCT1
      Related
      ENSMUSP00000104408.2, ENSMUST00000108778.8
      Conserved Domains (1) summary
      cd08745
      Location:114231
      RGS_RGS19; Regulator of G protein signaling (RGS) domain found in the RGS19 protein
    2. NM_001291206.1NP_001278135.1  regulator of G-protein signaling 19 isoform b

      See identical proteins and their annotated locations for NP_001278135.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) contains an alternate 5' terminal exon, and it thus differs in the 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b.
      Source sequence(s)
      AK042531, AL845173, BG085760, BY540555
      Consensus CDS
      CCDS17220.1
      UniProtKB/Swiss-Prot
      Q99L50, Q9CX84
      UniProtKB/TrEMBL
      Q78NN4, Q8CGT5
      Related
      ENSMUSP00000104406.2, ENSMUST00000108776.8
      Conserved Domains (1) summary
      cl02565
      Location:87204
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    3. NM_001291207.1NP_001278136.1  regulator of G-protein signaling 19 isoform c

      See identical proteins and their annotated locations for NP_001278136.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) contains an alternate 5' terminal exon and lacks an internal exon, and it thus differs in the 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (c) is shorter at the N-terminus, compared to isoform a. Both variants 4 and 5 encode isoform c.
      Source sequence(s)
      AK019401, AK042531, AL845173, BU694737, BY540555
      Consensus CDS
      CCDS71222.1
      UniProtKB/TrEMBL
      Q8BFU4, Q8CGT5
      Related
      ENSMUSP00000104403.2, ENSMUST00000108772.8
      Conserved Domains (1) summary
      cl02565
      Location:65182
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    4. NM_001291208.1NP_001278137.1  regulator of G-protein signaling 19 isoform c

      See identical proteins and their annotated locations for NP_001278137.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5) contains an alternate 5' terminal exon and lacks an internal exon, and it thus differs in the 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (c) is shorter at the N-terminus, compared to isoform a. Both variants 4 and 5 encode isoform c.
      Source sequence(s)
      AK042531, AL845173, BG085760, BY540555
      Consensus CDS
      CCDS71222.1
      UniProtKB/TrEMBL
      Q8BFU4, Q8CGT5
      Related
      ENSMUSP00000104402.2, ENSMUST00000108771.2
      Conserved Domains (1) summary
      cl02565
      Location:65182
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    5. NM_001291209.1NP_001278138.1  regulator of G-protein signaling 19 isoform d

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6) contains alternate 5' and 3' terminal exons, and it thus differs in both UTRs, initiates translation at a downstream in-frame start codon and contains an alternate 3' coding region, compared to variant 1. The encoded isoform (d) is shorter at the N-terminus and has a distinct C-terminus, compared to isoform a.
      Source sequence(s)
      AK019401, AK042531, AL845173, BY540555, BY549770, CF751080
      UniProtKB/TrEMBL
      B7ZCT0
      Related
      ENSMUSP00000104400.2, ENSMUST00000108769.8
      Conserved Domains (1) summary
      cl02565
      Location:52157
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    6. NM_001291210.1NP_001278139.1  regulator of G-protein signaling 19 isoform e

      See identical proteins and their annotated locations for NP_001278139.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (7) contains an alternate 5' terminal exon and lacks two internal exons, and it thus differs in the 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (e) is shorter at the N-terminus, compared to isoform a.
      Source sequence(s)
      AK019401, AK042531, AL845173, BY540555
      UniProtKB/Swiss-Prot
      Q9CX84
      UniProtKB/TrEMBL
      Q78NN4
      Conserved Domains (1) summary
      cl02565
      Location:1110
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    7. NM_026446.4NP_080722.1  regulator of G-protein signaling 19 isoform b

      See identical proteins and their annotated locations for NP_080722.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) contains an alternate 5' terminal exon, and it thus differs in the 5' UTR and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (b) is shorter at the N-terminus, compared to isoform a. Both variants 2 and 3 encode isoform b.
      Source sequence(s)
      AK019401, AK042531, AL845173, BY540555
      Consensus CDS
      CCDS17220.1
      UniProtKB/Swiss-Prot
      Q99L50, Q9CX84
      UniProtKB/TrEMBL
      Q78NN4, Q8CGT5
      Related
      ENSMUSP00000002532.3, ENSMUST00000002532.9
      Conserved Domains (1) summary
      cl02565
      Location:87204
      RGS; Regulator of G protein signaling (RGS) domain superfamily

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      181330212..181336330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030251895.1XP_030107755.1  regulator of G-protein signaling 19 isoform X2

    2. XM_030251897.2XP_030107757.1  regulator of G-protein signaling 19 isoform X4

      UniProtKB/TrEMBL
      B7ZCT0
      Conserved Domains (1) summary
      cl02565
      Location:30135
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    3. XM_030251896.1XP_030107756.1  regulator of G-protein signaling 19 isoform X3

      UniProtKB/TrEMBL
      B7ZCT0
      Conserved Domains (1) summary
      cl02565
      Location:52157
      RGS; Regulator of G protein signaling (RGS) domain superfamily
    4. XM_030251894.1XP_030107754.1  regulator of G-protein signaling 19 isoform X1

      UniProtKB/Swiss-Prot
      Q99L50, Q9CX84
      UniProtKB/TrEMBL
      Q78NN4, Q8CGT5
      Conserved Domains (1) summary
      cl02565
      Location:87204
      RGS; Regulator of G protein signaling (RGS) domain superfamily