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    Adra1a adrenergic receptor, alpha 1a [ Mus musculus (house mouse) ]

    Gene ID: 11549, updated on 11-Apr-2024

    Summary

    Official Symbol
    Adra1aprovided by MGI
    Official Full Name
    adrenergic receptor, alpha 1aprovided by MGI
    Primary source
    MGI:MGI:104773
    See related
    Ensembl:ENSMUSG00000045875 AllianceGenome:MGI:104773
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Adra1c
    Summary
    This gene encodes one of several multipass transmembrane proteins that function as G protein-coupled receptors. The encoded protein binds to epinephrine and norepinephrine to mediate signaling in cells of the cardiac, nervous, and other organ systems. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2012]
    Expression
    Biased expression in frontal lobe adult (RPKM 2.7), lung adult (RPKM 1.9) and 14 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Adra1a in Genome Data Viewer
    Location:
    14 D1; 14 34.6 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (66872705..67009549)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (66635251..66771240)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 57621 Neighboring gene predicted gene, 41184 Neighboring gene VISTA enhancer mm1500 Neighboring gene STARR-seq mESC enhancer starr_36998 Neighboring gene STARR-seq mESC enhancer starr_36999 Neighboring gene predicted gene 10032 Neighboring gene predicted gene 9130

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Clone Names

    • MGC130524

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables adrenergic receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables alpha1-adrenergic receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables alpha1-adrenergic receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables alpha1-adrenergic receptor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables alpha1-adrenergic receptor activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables protein heterodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of MAPK cascade IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in adenylate cyclase-activating adrenergic receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within adult heart development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in calcium ion transport into cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within cell growth involved in cardiac muscle cell development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in cell-cell signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within negative regulation of Rho protein signal transduction ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within negative regulation of autophagy IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within negative regulation of heart rate involved in baroreceptor response to increased systemic arterial blood pressure IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in neuron-glial cell signaling IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within organ growth IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in phospholipase C-activating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within phospholipase C-activating G protein-coupled receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
     
    involved_in pilomotor reflex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of ERK1 and ERK2 cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of MAPK cascade IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within positive regulation of MAPK cascade IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of MAPK cascade ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of action potential ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of cardiac muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of cardiac muscle hypertrophy IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of cytosolic calcium ion concentration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in positive regulation of cytosolic calcium ion concentration ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of heart rate ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of heart rate by epinephrine-norepinephrine IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within positive regulation of non-membrane spanning protein tyrosine kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of protein kinase C signaling ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of smooth muscle contraction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in positive regulation of smooth muscle contraction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of synaptic transmission, GABAergic ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in positive regulation of systemic arterial blood pressure ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within positive regulation of the force of heart contraction by epinephrine-norepinephrine IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in positive regulation of vasoconstriction ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in presynaptic modulation of chemical synaptic transmission ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of blood pressure IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of cardiac muscle contraction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of muscle contraction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of vasoconstriction IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to hormone ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to xenobiotic stimulus ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in GABA-ergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    located_in T-tubule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in Z disc ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in dopaminergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in glutamatergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nuclear membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in postsynaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in presynaptic membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    alpha-1A adrenergic receptor
    Names
    alpha-1A adrenoceptor
    alpha-1A adrenoreceptor
    alpha-1C adrenergic receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001271759.2NP_001258688.1  alpha-1A adrenergic receptor isoform 2

      See identical proteins and their annotated locations for NP_001258688.1

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      Consensus CDS
      CCDS70600.1
      UniProtKB/TrEMBL
      Q8BUE5
      Related
      ENSMUSP00000124322.2, ENSMUST00000159365.8
      Conserved Domains (1) summary
      cd15325
      Location:27337
      7tmA_alpha1A_AR; alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. NM_001271760.2NP_001258689.1  alpha-1A adrenergic receptor isoform 1

      See identical proteins and their annotated locations for NP_001258689.1

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      Consensus CDS
      CCDS27223.1
      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
      Related
      ENSMUSP00000125354.2, ENSMUST00000161339.2
      Conserved Domains (1) summary
      cd15325
      Location:27337
      7tmA_alpha1A_AR; alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors
    3. NM_001271761.2NP_001258690.1  alpha-1A adrenergic receptor isoform 3

      See identical proteins and their annotated locations for NP_001258690.1

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      Consensus CDS
      CCDS88696.1
      UniProtKB/TrEMBL
      Q8BXZ4
      Related
      ENSMUSP00000153103.2, ENSMUST00000225182.2
      Conserved Domains (2) summary
      cd14964
      Location:2953
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:27294
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    4. NM_001422092.1NP_001409021.1  alpha-1A adrenergic receptor isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
    5. NM_001422093.1NP_001409022.1  alpha-1A adrenergic receptor isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
    6. NM_001422095.1NP_001409024.1  alpha-1A adrenergic receptor isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
    7. NM_001422096.1NP_001409025.1  alpha-1A adrenergic receptor isoform 1

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
    8. NM_001422097.1NP_001409026.1  alpha-1A adrenergic receptor isoform 2

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      UniProtKB/TrEMBL
      Q8BUE5
    9. NM_001422098.1NP_001409027.1  alpha-1A adrenergic receptor isoform 3

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      UniProtKB/TrEMBL
      Q8BXZ4
    10. NM_013461.5NP_038489.2  alpha-1A adrenergic receptor isoform 1

      See identical proteins and their annotated locations for NP_038489.2

      Status: REVIEWED

      Source sequence(s)
      AC129570, AC154693
      Consensus CDS
      CCDS27223.1
      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
      Related
      ENSMUSP00000053703.2, ENSMUST00000054661.8
      Conserved Domains (1) summary
      cd15325
      Location:27337
      7tmA_alpha1A_AR; alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      66872705..67009549
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244926.4XP_011243228.1  alpha-1A adrenergic receptor isoform X2

      Conserved Domains (1) summary
      cd15325
      Location:27337
      7tmA_alpha1A_AR; alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. XM_011244925.4XP_011243227.1  alpha-1A adrenergic receptor isoform X1

      See identical proteins and their annotated locations for XP_011243227.1

      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
      Conserved Domains (1) summary
      cd15325
      Location:27337
      7tmA_alpha1A_AR; alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors
    3. XM_006518449.5XP_006518512.1  alpha-1A adrenergic receptor isoform X4

      Conserved Domains (2) summary
      cd14964
      Location:2854
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:27337
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    4. XM_036158409.1XP_036014302.1  alpha-1A adrenergic receptor isoform X5

      Conserved Domains (2) summary
      cd14964
      Location:2854
      7tm_GPCRs; TM helix 1 [structural motif]
      cl28897
      Location:27309
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    5. XM_011244923.4XP_011243225.1  alpha-1A adrenergic receptor isoform X1

      See identical proteins and their annotated locations for XP_011243225.1

      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
      Conserved Domains (1) summary
      cd15325
      Location:27337
      7tmA_alpha1A_AR; alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors
    6. XM_011244924.4XP_011243226.1  alpha-1A adrenergic receptor isoform X1

      See identical proteins and their annotated locations for XP_011243226.1

      UniProtKB/Swiss-Prot
      O54913, P97718, Q8BV77
      Conserved Domains (1) summary
      cd15325
      Location:27337
      7tmA_alpha1A_AR; alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors