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    CLCA3 chloride channel regulator 3 [ Bos taurus (cattle) ]

    Gene ID: 281694, updated on 11-Apr-2024

    Summary

    Gene symbol
    CLCA3
    Gene description
    chloride channel regulator 3
    See related
    Ensembl:ENSBTAG00000016712
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

    See CLCA3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (57411272..57444878, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL34-like Neighboring gene SH3 domain containing GRB2 like, endophilin B1 Neighboring gene outer dense fiber of sperm tails 2 like Neighboring gene calcium-activated chloride channel Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene chloride channel accessory 4 Neighboring gene chloride channel accessory 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    General protein information

    Preferred Names
    epithelial chloride channel protein
    Names
    calcium-activated chloride channel
    chloride channel, calcium activated, family member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_181018.2NP_851361.1  epithelial chloride channel protein precursor

      See identical proteins and their annotated locations for NP_851361.1

      Status: PROVISIONAL

      Source sequence(s)
      AF001261
      UniProtKB/TrEMBL
      F1N4Y8, O18741
      Related
      ENSBTAP00000072206.1, ENSBTAT00000073963.2
      Conserved Domains (3) summary
      cd00198
      Location:308462
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
      pfam08434
      Location:24897
      CLCA; Calcium-activated chloride channel
      cl19929
      Location:530570
      A2M_N; MG2 domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      57411272..57444878 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005204370.5XP_005204427.1  epithelial chloride channel protein isoform X2

      UniProtKB/TrEMBL
      F1N4Y8
      Conserved Domains (3) summary
      cd00198
      Location:254408
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
      pfam08434
      Location:1843
      CLCA; Calcium-activated chloride channel
      cl19929
      Location:476516
      A2M_N; MG2 domain
    2. XM_024984641.2XP_024840409.1  epithelial chloride channel protein isoform X1

      UniProtKB/TrEMBL
      F1N4Y8
      Related
      ENSBTAP00000033424.5, ENSBTAT00000033511.6
      Conserved Domains (1) summary
      pfam08434
      Location:32908
      CLCA; Calcium-activated chloride channel