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    Copg2os2 coatomer protein complex, subunit gamma 2, opposite strand 2 [ Mus musculus (house mouse) ]

    Gene ID: 100044236, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Copg2os2provided by MGI
    Official Full Name
    coatomer protein complex, subunit gamma 2, opposite strand 2provided by MGI
    Primary source
    MGI:MGI:1858731
    See related
    AllianceGenome:MGI:1858731
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Lb9; Mit1; Copg2as2
    Summary
    Is expressed in retina; retina ganglion cell layer; retina inner nuclear layer; and retina inner plexiform layer. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    6; 6 A3.3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (30761878..30764294)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene centrosomal protein 41 Neighboring gene predicted gene 13782 Neighboring gene STARR-positive B cell enhancer mm9_chr6:30643637-30643938 Neighboring gene STARR-seq mESC enhancer starr_15474 Neighboring gene mesoderm specific transcript Neighboring gene microRNA 335 Neighboring gene coatomer protein complex, subunit gamma 2 Neighboring gene RIKEN cDNA 4930412F09 gene Neighboring gene predicted gene, 38781 Neighboring gene testis specific gene A13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000072.7 Chromosome 6 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Allele-specific methylation at the promoter-associated CpG island of mouse Copg2. Yun J, et al. Mamm Genome, 2003 Jun. PMID 12879359
    2. Mit1/Lb9 and Copg2, new members of mouse imprinted genes closely linked to Peg1/Mest(1). Lee YJ, et al. FEBS Lett, 2000 Apr 28. PMID 10788617
    3. Molecular heterogeneity of developing retinal ganglion and amacrine cells revealed through single cell gene expression profiling. Trimarchi JM, et al. J Comp Neurol, 2007 Jun 20. PMID 17444492
    4. Expression at the imprinted dlk1-gtl2 locus is regulated by proneural genes in the developing telencephalon. Seibt J, et al. PLoS One, 2012. PMID 23139813, Free PMC Article
    5. Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Lumayag S, et al. Proc Natl Acad Sci U S A, 2013 Feb 5. PMID 23341629, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • Mest-linked imprinted transcript 1
    • coatomer protein complex, subunit gamma 2, antisense 2

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_002845.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AEKQ02054613, LXEJ02004924

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      30761878..30764294
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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