Tmem212 transmembrane protein 212 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Tmem212provided by RGD
Official Full Name: transmembrane protein 212provided by RGD
Primary source: RGD:1563109
See related: Ensembl:ENSRNOG00000012608 AllianceGenome:RGD:1563109
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: RGD1563109
Summary: Predicted to be integral component of membrane. Orthologous to human TMEM212 (transmembrane protein 212). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Lung (RPKM 27.7), Brain (RPKM 5.4) and 2 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 2q24

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	2	NC_086020.1 (112704547..112741924, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	2	NC_051337.1 (110775950..110813313, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	2	NC_005101.4 (113578614..113616786, complement)

Chromosome 2 - NC_086020.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: transmembrane protein 212

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001164438.1 → NP_001157910.1 transmembrane protein 212 isoform 1

Status: VALIDATED

Description

Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).

Source sequence(s)

JAXUCZ010000002

UniProtKB/TrEMBL

A0A8I6A9Z3, M0RBS4

Related

ENSRNOP00000067020.1, ENSRNOT00000074723.2
NM_001164439.1 → NP_001157911.1 transmembrane protein 212 isoform 2

See identical proteins and their annotated locations for NP_001157911.1

Status: VALIDATED

Description

Transcript Variant: This variant (2) uses an alternate exon in the 3' coding region, compared to variant 1. The resulting isoform (2) has a shorter and distinct C-terminus, compared to isoform 1.

Source sequence(s)

BE108013, CO384351

UniProtKB/TrEMBL

A0A8I6A9Z3, A6IHH6, D3ZW63

Related

ENSRNOP00000016858.6, ENSRNOT00000016858.9