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    CPR41 cuticular protein RR-1 motif 41 [ Bombyx mori (domestic silkworm) ]

    Gene ID: 693048, updated on 9-Feb-2024

    Summary

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    Gene symbol
    CPR41
    Gene description
    cuticular protein RR-1 motif 41
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bombyx mori
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Bombycidae; Bombycinae; Bombyx
    Also known as
    Lcp30; BmorCPR41
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    Genomic context

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    See CPR41 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_01 current ASM3026992v2 (GCF_030269925.1) 22 NC_085128.1 (9081957..9084778)
    103 previous assembly Bmori_2016v1.0 (GCF_014905235.1) 22 NC_051379.1 (9102356..9105177)

    Chromosome 22 - NC_085128.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134200984 Neighboring gene uncharacterized LOC134200985 Neighboring gene cuticular protein RR-1 motif 42 Neighboring gene cuticular protein glycine-rich 21 Neighboring gene cuticular protein RR-1 motif 40

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Structure and developmental expression of a larval cuticle protein gene of the silkworm, Bombyx mori. Nakato H, et al. Biochim Biophys Acta, 1994 May 17. PMID 8193166
    2. Genome-wide identification of cuticular protein genes in the silkworm, Bombyx mori. Futahashi R, et al. Insect Biochem Mol Biol, 2008 Dec. PMID 19280704
    3. Large scale full-length cDNA sequencing reveals a unique genomic landscape in a lepidopteran model insect, Bombyx mori. Suetsugu Y, et al. G3 (Bethesda), 2013 Sep 4. PMID 23821615, Free PMC Article
    4. Transcriptomic analysis of developmental features of Bombyx mori wing disc during metamorphosis. Ou J, et al. BMC Genomics, 2014 Sep 27. PMID 25261999, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of chitin-based larval cuticle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    larval cuticle protein LCP-30

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001044025.1 → NP_001037490.1  larval cuticle protein LCP-30 precursor

      See identical proteins and their annotated locations for NP_001037490.1

      Status: PROVISIONAL

      Source sequence(s)
      X74320
      UniProtKB/Swiss-Prot
      Q08738
      UniProtKB/TrEMBL
      C0H6N3
      Conserved Domains (1) summary
      pfam00379
      Location:175 → 230
      Chitin_bind_4; Insect cuticle protein

    RefSeqs of Annotated Genomes: GCF_030269925.1-RS_2024_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3026992v2 Primary Assembly

    Genomic

    1. NC_085128.1 Reference ASM3026992v2 Primary Assembly

      Range
      9081957..9084778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08738.2 GenPept UniProtKB/Swiss-Prot:Q08738

    Gene LinkOut

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