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    stau double-stranded RNA-binding protein Staufen [ Apis mellifera (honey bee) ]

    Gene ID: 551666, updated on 22-May-2024

    Summary

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    Gene symbol
    stau
    Gene description
    double-stranded RNA-binding protein Staufen
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB54264
    Orthologs
    fruit fly all
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    Genomic context

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    See stau in Genome Data Viewer
    Location:
    chromosome: LG10
    Exon count:
    11
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG10 NC_037647.1 (8053507..8059967, complement)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG10 NC_007079.3 (7298685..7305466)

    Linkage Group LG10 - NC_037647.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 227 Neighboring gene cilia- and flagella-associated protein 20 Neighboring gene integrator complex subunit 6 Neighboring gene deoxyribodipyrimidine photo-lyase Neighboring gene pseudouridine-metabolizing bifunctional protein C1861.05

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    2. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    3. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    double-stranded RNA-binding protein Staufen homolog 2
    Names
    maternal effect protein staufen

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037647.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      8053507..8059967 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016914377.2 → XP_016769866.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X4

      UniProtKB/TrEMBL
      A0A7M7M500, A0A8B7KMC5

    2. XM_003250420.4 → XP_003250468.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X5

      UniProtKB/TrEMBL
      A0A7M7LK69, A0A8B6XXC1
      Conserved Domains (3) summary
      smart00358
      Location:184 → 247
      DSRM; Double-stranded RNA binding motif
      cd00048
      Location:517 → 567
      DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
      pfam16482
      Location:675 → 747
      Staufen_C; Staufen C-terminal domain

    3. XM_016914376.2 → XP_016769865.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X2

      UniProtKB/TrEMBL
      A0A7M7IN48, A0A8B7KP59

    4. XM_006564450.3 → XP_006564513.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A7M7GS10, A0A8B6Z3C7
      Conserved Domains (3) summary
      smart00358
      Location:184 → 247
      DSRM; Double-stranded RNA binding motif
      cd00048
      Location:517 → 567
      DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
      pfam16482
      Location:675 → 747
      Staufen_C; Staufen C-terminal domain

    5. XM_006564451.3 → XP_006564514.1  double-stranded RNA-binding protein Staufen homolog 2 isoform X3

      UniProtKB/TrEMBL
      A0A7M7GRE2, A0A8B6Z1I5
      Conserved Domains (3) summary
      smart00358
      Location:180 → 243
      DSRM; Double-stranded RNA binding motif
      cd00048
      Location:513 → 563
      DSRM; Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, ...
      pfam16482
      Location:671 → 743
      Staufen_C; Staufen C-terminal domain
    Nucleotide Protein Strain
    Heading Accession and Version

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