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    BTVs9gp1 VP6 protein [ Bluetongue virus ]

    Gene ID: 2943150, updated on 18-Aug-2023

    Summary

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    Gene symbol
    BTVs9gp1
    Gene description
    VP6 protein
    Locus tag
    BTVs9gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bluetongue virus (serotype: 10)
    Lineage
    Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus
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    Genomic context

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    Location:
    clone: A88, segment: 9
    Sequence:
    NC_006008.2 (16..1005)

    NC_006008.2Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006008.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bioinformatic analysis suggests that the Orbivirus VP6 cistron encodes an overlapping gene. Firth AE. Virol J, 2008 Apr 14. PMID 18489030, Free PMC Article
    2. Interaction between a Unique Minor Protein and a Major Capsid Protein of Bluetongue Virus Controls Virus Infectivity. Matsuo E, et al. J Virol, 2018 Feb 1. PMID 29142128, Free PMC Article
    3. Completion of the sequence of bluetongue virus serotype 10 by the characterization of a structural protein, VP6, and a non-structural protein, NS2. Fukusho A, et al. J Gen Virol, 1989 Jul. PMID 2544660

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. interaction between VP3 and VP6 could be important in the packaging of the viral genome and early stages of particle formation
      Title: Interaction between a Unique Minor Protein and a Major Capsid Protein of Bluetongue Virus Controls Virus Infectivity.
    2. bioinformatic analysis indicates that VP6 cistron encodes an overlapping gene
      Title: Bioinformatic analysis suggests that the Orbivirus VP6 cistron encodes an overlapping gene.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    misc_difference

    • Loc: 192 replace =
    • Loc: 226 replace = gg
    • Loc: 248 replace = aa
    • Loc: 253 replace =
    • Loc: 913 replace =
    • Loc: 936 replace =
    • Loc: 944 replace =

    General protein information

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    Preferred Names
    VP6 protein
    YP_052953.2
    • minor inner capsid protein, structural protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006008.2 Reference assembly

      Range
      16..1005
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_052953.2 VP6 protein [Bluetongue virus]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P0C6L1, P23066, Q6LCJ9, Q98829
      UniProtKB/TrEMBL
      A0A5B8YW99
      Conserved Domains (1) summary
      pfam01516
      Location:6 → 329
      Orbi_VP6; Orbivirus helicase VP6
    Nucleotide Protein
    Heading Accession and Version

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