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    Unc93a unc-93 homolog A [ Mus musculus (house mouse) ]

    Gene ID: 381058, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Unc93aprovided by MGI
    Official Full Name
    unc-93 homolog Aprovided by MGI
    Primary source
    MGI:MGI:1933250
    See related
    Ensembl:ENSMUSG00000067049 AllianceGenome:MGI:1933250
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Unc93l; unc-93A
    Summary
    Predicted to be located in plasma membrane. Orthologous to human UNC93A (unc-93 homolog A). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in small intestine adult (RPKM 10.1), duodenum adult (RPKM 7.8) and 7 other tissues See more
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    Genomic context

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    Location:
    17 A1; 17 8.78 cM
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (13327504..13362553, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (13108617..13143780, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene t-complex protein 10b Neighboring gene STARR-seq mESC enhancer starr_41866 Neighboring gene predicted gene 11166 Neighboring gene predicted gene, 23050 Neighboring gene STARR-seq mESC enhancer starr_41868 Neighboring gene predicted gene, 36277 Neighboring gene STARR-seq mESC enhancer starr_41870 Neighboring gene predicted gene, 36798 Neighboring gene predicted gene, 36684 Neighboring gene STARR-seq mESC enhancer starr_41871 Neighboring gene predicted gene 10512

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Synteny of orthologous genes conserved in mammals, snake, fly, nematode, and fission yeast. Trachtulec Z, et al. Mamm Genome, 2001 Mar. PMID 11252172
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    protein unc-93 homolog A
    Names
    unc93 homolog A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199252.2 → NP_954860.1  protein unc-93 homolog A

      See identical proteins and their annotated locations for NP_954860.1

      Status: VALIDATED

      Source sequence(s)
      AC166360, AJ422143
      Consensus CDS
      CCDS28402.1
      UniProtKB/Swiss-Prot
      Q710D3
      UniProtKB/TrEMBL
      B9EIH9
      Related
      ENSMUSP00000082032.6, ENSMUST00000084966.6
      Conserved Domains (1) summary
      cd17406
      Location:8 → 433
      MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      13327504..13362553 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011246216.3 → XP_011244518.1  protein unc-93 homolog A isoform X1

      See identical proteins and their annotated locations for XP_011244518.1

      UniProtKB/Swiss-Prot
      Q710D3
      UniProtKB/TrEMBL
      B9EIH9
      Conserved Domains (1) summary
      cd17406
      Location:8 → 433
      MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

    2. XM_011246217.3 → XP_011244519.1  protein unc-93 homolog A isoform X1

      See identical proteins and their annotated locations for XP_011244519.1

      UniProtKB/Swiss-Prot
      Q710D3
      UniProtKB/TrEMBL
      B9EIH9
      Conserved Domains (1) summary
      cd17406
      Location:8 → 433
      MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

    3. XM_006523333.5 → XP_006523396.1  protein unc-93 homolog A isoform X2

      UniProtKB/TrEMBL
      B9EIH9
      Conserved Domains (1) summary
      cd17406
      Location:23 → 425
      MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

    4. XM_011246215.4 → XP_011244517.1  protein unc-93 homolog A isoform X1

      See identical proteins and their annotated locations for XP_011244517.1

      UniProtKB/Swiss-Prot
      Q710D3
      UniProtKB/TrEMBL
      B9EIH9
      Conserved Domains (1) summary
      cd17406
      Location:8 → 433
      MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters

    5. XM_011246218.3 → XP_011244520.1  protein unc-93 homolog A isoform X1

      See identical proteins and their annotated locations for XP_011244520.1

      UniProtKB/Swiss-Prot
      Q710D3
      UniProtKB/TrEMBL
      B9EIH9
      Conserved Domains (1) summary
      cd17406
      Location:8 → 433
      MFS_unc93A_like; Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q710D3.1 GenPept UniProtKB/Swiss-Prot:Q710D3

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