U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    Ncor2 nuclear receptor corepressor 2 [ Arvicola amphibius (Eurasian water vole) ]

    Gene ID: 119824691, updated on 21-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Ncor2
    Gene description
    nuclear receptor corepressor 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Arvicola amphibius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Arvicolinae; Arvicola
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Ncor2 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    50
    Annotation release Status Assembly Chr Location
    101 current mArvAmp1.2 (GCF_903992535.2) 10 NC_052056.1 (83086998..83242929, complement)
    100 previous assembly mArvAmp1.1 (GCF_903992535.1) 10 NC_052056.1 (83086998..83242880, complement)

    Chromosome 10 - NC_052056.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119825338 Neighboring gene refilin A Neighboring gene 40S ribosomal protein S2-like Neighboring gene scavenger receptor class B member 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    LOW QUALITY PROTEIN: nuclear receptor corepressor 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Arvicola amphibius Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mArvAmp1.2

    Genomic

    1. NC_052056.1 Reference mArvAmp1.2

      Range
      83086998..83242929 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038345068.2 → XP_038200996.1  LOW QUALITY PROTEIN: nuclear receptor corepressor 2

      Conserved Domains (6) summary
      PHA03247
      Location:1911 → 2283
      PHA03247; large tegument protein UL36; Provisional
      COG0419
      Location:169 → 411
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      COG5259
      Location:541 → 654
      RSC8; RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription]
      pfam00249
      Location:619 → 662
      Myb_DNA-binding; Myb-like DNA-binding domain
      pfam15784
      Location:141 → 229
      GPS2_interact; G-protein pathway suppressor 2-interacting domain
      cl21498
      Location:432 → 475
      SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.