U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    ALG12 ALG12, alpha-1,6-mannosyltransferase [ Gallus gallus (chicken) ]

    Gene ID: 417733, updated on 6-Jun-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ALG12provided by CGNC
    Official Full Name
    ALG12, alpha-1,6-mannosyltransferaseprovided by CGNC
    Primary source
    CGNC:50582
    See related
    Ensembl:ENSGALG00010009003
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    alpha-1; 6-mannosyltransferase)
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ALG12 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (19055339..19099213, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (19286961..19330803, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107049439 Neighboring gene bromodomain containing 1 Neighboring gene zinc finger BED-type containing 4 Neighboring gene cysteine rich with EGF like domains 2 Neighboring gene uncharacterized LOC112533145 Neighboring gene uncharacterized LOC112533147

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Gene expression profiling of chicken primordial germ cell ESTs. Han JY, et al. BMC Genomics, 2006 Aug 30. PMID 16939661, Free PMC Article
    2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
    3. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-1,6-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein N-linked glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase
    Names
    6-mannosyltransferase ALG12
    alpha-1,6-mannosyltransferase ALG12
    asparagine-linked glycosylation 12 homolog (yeast, alpha-1,6-mannosyltransferase)
    asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog
    NP_001034359.2
    XP_015127965.1
    XP_015128024.1
    XP_015128077.1
    XP_025003254.1
    XP_040542974.1
    XP_040543113.1
    XP_040543359.1
    XP_046763079.1
    XP_046763080.1
    XP_046763081.1
    XP_046763082.1
    XP_046763083.1
    XP_046763084.1
    XP_046763085.1
    XP_046763086.1
    XP_046763087.1
    XP_046790046.1
    XP_046790108.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001039270.3 → NP_001034359.2  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000012
      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
      Conserved Domains (1) summary
      cl21590
      Location:16 → 350
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      19055339..19099213 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934152.1 → XP_046790108.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    2. XM_025147486.3 → XP_025003254.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
      Conserved Domains (1) summary
      cl21590
      Location:16 → 350
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    3. XM_015272591.4 → XP_015128077.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
      Conserved Domains (1) summary
      cl21590
      Location:16 → 350
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    4. XM_040687179.2 → XP_040543113.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
      Conserved Domains (1) summary
      cl21590
      Location:16 → 350
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    5. XM_015272538.4 → XP_015128024.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
      Related
      ENSGALP00010012247.1, ENSGALT00010021498.1
      Conserved Domains (1) summary
      cl21590
      Location:16 → 350
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    6. XM_015272479.4 → XP_015127965.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
      Related
      ENSGALP00010012243.1, ENSGALT00010021486.1
      Conserved Domains (1) summary
      cl21590
      Location:16 → 350
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    7. XM_046934090.1 → XP_046790046.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    8. XM_040687425.2 → XP_040543359.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
      Conserved Domains (1) summary
      cl21590
      Location:16 → 350
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    9. XM_040687040.2 → XP_040542974.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
      Related
      ENSGALP00010012236.1, ENSGALT00010021475.1
      Conserved Domains (1) summary
      cl21590
      Location:16 → 350
      PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      19286961..19330803 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046907131.1 → XP_046763087.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    2. XM_046907129.1 → XP_046763085.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    3. XM_046907124.1 → XP_046763080.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    4. XM_046907130.1 → XP_046763086.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    5. XM_046907125.1 → XP_046763081.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    6. XM_046907123.1 → XP_046763079.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    7. XM_046907127.1 → XP_046763083.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    8. XM_046907126.1 → XP_046763082.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077

    9. XM_046907128.1 → XP_046763084.1  dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y437, F1P077
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.