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    RFX4 regulatory factor X4 [ Gallus gallus (chicken) ]

    Gene ID: 418070, updated on 5-Mar-2024

    Summary

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    Symbol
    RFX4provided by CGNC
    Full Name
    regulatory factor X4provided by CGNC
    Primary source
    CGNC:9598
    See related
    Ensembl:ENSGALG00010010996
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RFX4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (53758151..53849397, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (54049202..54140349, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 263 Neighboring gene RIC8 guanine nucleotide exchange factor B Neighboring gene RNA polymerase III subunit B Neighboring gene t-complex 11 family X2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor RFX4
    Names
    regulatory factor X, 4 (influences HLA class II expression)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      53758151..53849397 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004937813.5 → XP_004937870.2  transcription factor RFX4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y7N9, A0A8V0YBG3
      Related
      ENSGALP00010014981.1, ENSGALT00010026357.1

    2. XM_040702998.2 → XP_040558932.1  transcription factor RFX4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y2Z9

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      54049202..54140349 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040657431.2 → XP_040513365.1  transcription factor RFX4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y7N9, A0A8V0YBG3

    2. XM_040657433.2 → XP_040513367.1  transcription factor RFX4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y2Z9
    Nucleotide Protein
    Heading Accession and Version

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