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    PXYLP1 2-phosphoxylose phosphatase 1 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100386252, updated on 6-Jun-2024

    Summary

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    Gene symbol
    PXYLP1
    Gene description
    2-phosphoxylose phosphatase 1
    See related
    Ensembl:ENSCJAG00000002072
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Also known as
    ACPL2
    Orthologs
    human mouse all
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    Genomic context

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    See PXYLP1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 17 NC_071458.1 (36270754..36332777, complement)
    105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 17 NC_048399.1 (36432006..36494916, complement)

    Chromosome 17 - NC_071458.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 38 Neighboring gene uncharacterized LOC108588798 Neighboring gene uncharacterized LOC100895947 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 4 Neighboring gene solute carrier family 25 member 36

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycosaminoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    2-phosphoxylose phosphatase 1
    Names
    acid phosphatase-like 2
    acid phosphatase-like protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCalJa1.2.pat.X

    Genomic

    1. NC_071458.1 Reference mCalJa1.2.pat.X

      Range
      36270754..36332777 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008983745.4 → XP_008981993.2  2-phosphoxylose phosphatase 1 isoform X2

      UniProtKB/TrEMBL
      F6T9H7, F7ABR8, U3E0V9
      Conserved Domains (1) summary
      cl11399
      Location:87 → 424
      HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction

    2. XM_054246895.1 → XP_054102870.1  2-phosphoxylose phosphatase 1 isoform X1

      UniProtKB/TrEMBL
      F7ABR8

    3. XM_035277721.2 → XP_035133612.1  2-phosphoxylose phosphatase 1 isoform X2

      UniProtKB/TrEMBL
      F6T9H7, F7ABR8, U3E0V9
      Conserved Domains (1) summary
      cl11399
      Location:87 → 424
      HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction

    4. XM_054246897.1 → XP_054102872.1  2-phosphoxylose phosphatase 1 isoform X1

      UniProtKB/TrEMBL
      F7ABR8

    5. XM_054246896.1 → XP_054102871.1  2-phosphoxylose phosphatase 1 isoform X1

      UniProtKB/TrEMBL
      F7ABR8

    6. XM_054246898.1 → XP_054102873.1  2-phosphoxylose phosphatase 1 isoform X3

      UniProtKB/TrEMBL
      F7ABR8

    7. XM_035277723.2 → XP_035133614.1  2-phosphoxylose phosphatase 1 isoform X4

      UniProtKB/TrEMBL
      F7ABR8, F7E8K8
      Conserved Domains (1) summary
      cl11399
      Location:71 → 408
      HP; Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction
    Nucleotide Protein
    Heading Accession and Version

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