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    Gm20590 predicted gene, 20590 [ Mus musculus (house mouse) ]

    Gene ID: 100418285, updated on 8-Feb-2024

    Summary

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    Official Symbol
    Gm20590provided by MGI
    Official Full Name
    predicted gene, 20590provided by MGI
    Gene description
    upstream binding transcription factor, RNA polymerase I pseudogene
    Primary source
    MGI:MGI:5295696
    See related
    AllianceGenome:MGI:5295696
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    Location:
    13 C1; 13 40.35 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (74653141..74718675, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (74505022..74570556, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA E430024I08 gene Neighboring gene STARR-seq mESC enhancer starr_35011 Neighboring gene predicted gene, 57595 Neighboring gene STARR-positive B cell enhancer ABC_E4079 Neighboring gene STARR-positive B cell enhancer ABC_E9401 Neighboring gene zinc finger protein 825 Neighboring gene STARR-seq mESC enhancer starr_35015 Neighboring gene STARR-positive B cell enhancer ABC_E7252 Neighboring gene stomatin (Epb7.2)-like 2 pseudogene Neighboring gene predicted gene, 57808 Neighboring gene predicted gene, 57809 Neighboring gene STARR-seq mESC enhancer starr_35022 Neighboring gene STARR-seq mESC enhancer starr_35023 Neighboring gene predicted gene, 46430

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EUCOMM--the European conditional mouse mutagenesis program. Friedel RH, et al. Brief Funct Genomic Proteomic, 2007 Sep. PMID 17967808
    2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    3. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • upstream binding transcription factor, RNA polymerase I pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_019417.1 

      Range
      101..65635
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      74653141..74718675 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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